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  5. lcl|BLLF01000636.1_cds_GFH13657.1_8134

lcl|BLLF01000636.1_cds_GFH13657.1_8134 (HaLaN_09586, GFH13657)


Aliases : HaLaN_09586, GFH13657

Description : Starch synthase, catalytic domain [Interproscan].


Gene families : OG_01_0000642 (OrthoFinder) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000636.1_cds_GFH13657.1_8134
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020746.8 tig00020746_g13662.t1 Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 OrthoFinder
Cre06.g282000 30779862, SSS3 Carbohydrate metabolism.starch... 0.03 OrthoFinder
Cre13.g579582 30783995 Starch synthase 3, chloroplastic/amyloplastic... 0.02 OrthoFinder
Cre16.g665800 30777013, SSS4 Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 OrthoFinder
Dusal.0196s00013.1 33200613 Glycosyl transferase, family 1; Carbohydrate binding... 0.02 OrthoFinder
Dusal.2049s00001.1 33192974 Carbohydrate binding module family 25 [Interproscan]. 0.02 OrthoFinder
Vocar.0001s0072.1 32885071 Glycosyl transferase, family 1; Starch synthase,... 0.02 OrthoFinder
XM_002508039.1 MICPUN_83891, 83891 Glycosyltransferase family 5 protein (SSIIIC) 0.02 OrthoFinder
XM_003063432.1 MicpuC2_36395, 36395 Soluble starch synthase (SSIIIB) 0.02 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44481.1_2063 PRW44481 Glycosyltransferase family 5 0.02 OrthoFinder
lcl|LHPG02000016.1_cds_PRW33651.1_3248 PRW33651 Soluble starch synthase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 1 176
No external refs found!