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  5. lcl|BLLF01000635.1_cds_GFH13638.1_8115

lcl|BLLF01000635.1_cds_GFH13638.1_8115 (HaLaN_09566, GFH13638)


Aliases : HaLaN_09566, GFH13638

Description : KOW domain-containing protein


Gene families : OG_01_0001143 (OrthoFinder) Phylogenetic Tree(s): OG0001143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000635.1_cds_GFH13638.1_8115
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000455.16 tig00000455_g1004.t1 No description available 0.02 OrthoFinder
Cre07.g330450 30774865 Protein biosynthesis.organelle translation... 0.02 OrthoFinder
Cre16.g652550 30778177, PRPL24 Protein biosynthesis.organelle translation... 0.12 OrthoFinder
Cz13g14230.t1 No alias Ribosomal protein L24 [Interproscan]. 0.12 OrthoFinder
Dusal.0336s00012.1 33190830 Hypothetical protein 0.01 OrthoFinder
EOD36197 No alias Ribosomal protein L24 [Interproscan]. 0.04 OrthoFinder
EOD38740 No alias Ribosomal protein L24 [Interproscan]. 0.02 OrthoFinder
OT_11G00790.1 No alias Ribosomal protein L24 [Interproscan]. 0.07 OrthoFinder
PTI_15G01360.1 No alias Ribosomal protein L24 [Interproscan]. 0.03 OrthoFinder
Sro1177_g249450.1 Contig1274.g11886 Protein L24 0.06 OrthoFinder
Sro51_chlor_g029590.1 Rpl24 Rpl24 0.05 OrthoFinder
Vocar.0032s0031.1 32893715 Ribosomal protein L24; KOW [Interproscan]. 0.04 OrthoFinder
XM_002509009.1 MICPUN_109273, 109273 Ribosomal protein L24 [Interproscan]. 0.11 OrthoFinder
XM_003059801.1 MicpuC2_18221, 18221 Ribosomal protein L24; KOW [Interproscan]. 0.01 OrthoFinder
XM_003061663.1 MicpuC2_37566, 37566 Ribosomal protein L24 [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000022.1_cds_PRW20692.1_5226 PRW20692 50S ribosomal chloroplastic 0.12 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491975.1_4983 KAA8491975 Putative 39S ribosomal protein L24, mitochondrial 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Enrichment
MF GO:0004779 sulfate adenylyltransferase activity IEP Enrichment
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006595 polyamine metabolic process IEP Enrichment
BP GO:0006596 polyamine biosynthetic process IEP Enrichment
BP GO:0006597 spermine biosynthetic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0008215 spermine metabolic process IEP Enrichment
BP GO:0008216 spermidine metabolic process IEP Enrichment
BP GO:0008295 spermidine biosynthetic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP Enrichment
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0009309 amine biosynthetic process IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR005824 KOW 69 100
IPR003256 Ribosomal_L24 102 165
No external refs found!