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  5. lcl|BLLF01000628.1_cds_GFH13571.1_8048

lcl|BLLF01000628.1_cds_GFH13571.1_8048 (HaLaN_09486, GFH13571)


Aliases : HaLaN_09486, GFH13571

Description : Carotene biosynthesis-related protein


Gene families : OG_01_0000479 (OrthoFinder) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000628.1_cds_GFH13571.1_8048
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Cre07.g320400 30774456 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder
Cre07.g320450 30775051 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder
Cre08.g384650 30773689 Photosynthesis.photophosphorylation.photosystem... 0.07 OrthoFinder
Cre09.g394325 30780217, ELI3 Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder
Cre14.g626750 30776408 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder
Cre16.g679250 30778123, ELI1 Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder
Cz07g29280.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Cz07g30110.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Cz08g00120.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.07 OrthoFinder
Cz14g24190.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Cz17g16050.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.06 OrthoFinder
Dusal.0361s00001.1 33202645 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Dusal.0419s00009.1 33196975 Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
Dusal.1125s00002.1 33199649 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
Transcript_contig_55820 55820 Hypothetical protein 0.02 OrthoFinder
Vocar.0006s0022.1 32894246 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
XM_003057940.1 MicpuC2_70823, 70823 Early light induced protein-like protein, with fasciclin... 0.02 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493242.1_9543 KAA8493242 Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 71 174
No external refs found!