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  5. Cpa|evm.model.tig00021357.12

Cpa|evm.model.tig00021357.12 (tig00021357_g20745.t1)


Aliases : tig00021357_g20745.t1

Description : Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC4 component


Gene families : OG_01_0003725 (OrthoFinder) Phylogenetic Tree(s): OG0003725_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021357.12
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
Cre06.g251800 30778780, RFC4 Cell cycle.interphase.DNA... 0.02 OrthoFinder
Cz16g15180.t1 No alias ATPase, AAA-type, core [Interproscan]. 0.03 OrthoFinder
EOD29044 No alias ATPase, AAA-type, core [Interproscan]. 0.02 OrthoFinder
Vocar.0015s0333.1 32899219 ATPase, AAA-type, core; Replication factor C, C-terminal... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0003352 regulation of cilium movement IEP Enrichment
MF GO:0004096 catalase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0032879 regulation of localization IEP Enrichment
BP GO:0032886 regulation of microtubule-based process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0051270 regulation of cellular component movement IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0060632 regulation of microtubule-based movement IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR013748 Rep_factorC_C 208 292
IPR003959 ATPase_AAA_core 39 165
IPR013221 Mur_ligase_cen 493 693
No external refs found!