lcl|BLLF01000592.1_cds_GFH13267.1_7744 (HaLaN_09114, GFH13267)

Aliases : HaLaN_09114, GFH13267

Description : Putative arginine--tRNA ligase, cytoplasmic

Gene families : OG_01_0000600 (OrthoFinder) Phylogenetic Tree(s): OG0000600_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: lcl|BLLF01000592.1_cds_GFH13267.1_7744
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000711.7 tig00000711_g3368.t1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder
Cre03.g143887 30787653 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 OrthoFinder
Cz04g31060.t1 No alias Arginyl tRNA synthetase N-terminal domain; Arginyl-tRNA... 0.02 OrthoFinder
EOD23606 No alias Arginyl-tRNA synthetase, catalytic core domain; Arginyl... 0.02 OrthoFinder
EOD28352 No alias Arginine-tRNA ligase [Ensembl]. 0.01 OrthoFinder
TP13G01500.1 No alias DALR anticodon binding; Arginyl-tRNA synthetase,... 0.01 OrthoFinder
XM_003056533.1 MicpuC2_31931, 31931 Arginyl-tRNA synthetase 0.01 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45481.1_1608 PRW45481 Arginine-tRNA chloroplastic mitochondrial-like isoform... 0.02 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494154.1_4018 KAA8494154 Arginine--tRNA ligase 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004814 arginine-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006420 arginyl-tRNA aminoacylation IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Enrichment
BP GO:0006098 pentose-phosphate shunt IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006740 NADPH regeneration IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051156 glucose 6-phosphate metabolic process IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
InterPro domains Description Start Stop
IPR035684 ArgRS_core 128 192
IPR005148 Arg-tRNA-synth_N 14 102
No external refs found!