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  5. Cpa|evm.model.tig00021352.57

Cpa|evm.model.tig00021352.57 (tig00021352_g20724.t1)


Aliases : tig00021352_g20724.t1

Description : Protein biosynthesis.translation elongation.eEF1A aminoacyl-tRNA binding factor


Gene families : OG_01_0000147 (OrthoFinder) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021352.57
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Cre12.g498600 30792534 Elongation factor 1-alpha OS=Glycine max 0.04 OrthoFinder
Cz16g05140.t1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.04 OrthoFinder
Dusal.0162s00022.1 33196140 Transcription factor, GTP-binding domain; Translation... 0.04 OrthoFinder
EOD28679 No alias Transcription factor, GTP-binding domain [Interproscan]. 0.03 OrthoFinder
EOD35459 No alias Putative EF-1 alpha/Tu like protein [Ensembl]. 0.11 OrthoFinder
OT_13G02300.1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.02 OrthoFinder
PTI_13G03040.1 No alias Translation elongation factor EFTu-like, domain 2;... 0.08 OrthoFinder
SymbC1.scaffold16515.2 16515.2 Translation elongation factor EFTu/EF1A, C-terminal... 0.04 OrthoFinder
SymbC1.scaffold9283.4 9283.4 Transcription factor, GTP-binding domain [Interproscan]. 0.01 OrthoFinder
XM_003058760.1 MicpuC2_33445, 33445 Translation elongation factor EFTu-like, domain 2;... 0.03 OrthoFinder
lcl|LHPG02000010.1_cds_PRW50937.1_1128 PRW50937 Eukaryotic translation elongation factor 1 alpha 2 0.07 OrthoFinder
lcl|LHPG02000010.1_cds_PRW51008.1_1130 PRW51008 Eukaryotic translation elongation factor 1 alpha 2 0.05 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494988.1_3518 KAA8494988 Elongation factor 1-alpha 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 5 222
IPR004161 EFTu-like_2 248 313
IPR004160 Transl_elong_EFTu/EF1A_C 322 430
No external refs found!