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  5. Cpa|evm.model.tig00021352.24

Cpa|evm.model.tig00021352.24 (tig00021352_g20694.t1)


Aliases : tig00021352_g20694.t1

Description : Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana


Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021352.24
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Cz09g20160.t1 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
EOD12125 No alias Regulator of chromosome condensation (RCC1) repeat;... 0.02 OrthoFinder
Sro289_g109030.1 Contig4471.g33587 RCC1 and BTB domain-containing protein 2 0.02 OrthoFinder
SymbC1.scaffold3997.3 3997.3 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
TP19G02490.1 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
Vocar.0006s0269.1 32893895 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
Vocar.0017s0213.1 32891365 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
XM_002501718.1 MICPUN_57855, 57855 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
XM_002508379.1 MICPUN_69279, 69279 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.03 OrthoFinder
XM_003058490.1 MicpuC2_17539, 17539 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 966 1037
IPR000626 Ubiquitin-like_dom 67 144
IPR003409 MORN 1331 1351
IPR003409 MORN 1513 1524
IPR003409 MORN 1377 1391
IPR000408 Reg_chr_condens 329 378
IPR000408 Reg_chr_condens 383 429
IPR000408 Reg_chr_condens 433 485
IPR000408 Reg_chr_condens 489 537
No external refs found!