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  5. lcl|BLLF01000546.1_cds_GFH12852.1_7329

lcl|BLLF01000546.1_cds_GFH12852.1_7329 (HaLaN_08616, GFH12852)


Aliases : HaLaN_08616, GFH12852

Description : Reverse transcriptase Ty1/copia-type domain-containing protein


Gene families : OG_01_0000004 (OrthoFinder) Phylogenetic Tree(s): OG0000004_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000546.1_cds_GFH12852.1_7329
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01000005.1_cds_GFH05660.1_137 HaLaN_00159, GFH05660 Hypothetical protein 0.08 OrthoFinder
lcl|BLLF01000032.1_cds_GFH06309.1_786 HaLaN_00918, GFH06309 Hypothetical protein 0.06 OrthoFinder
lcl|BLLF01000075.1_cds_GFH07119.1_1596 HaLaN_01875, GFH07119 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01000084.1_cds_GFH07275.1_1752 HaLaN_02057, GFH07275 Hypothetical protein 0.06 OrthoFinder
lcl|BLLF01000154.1_cds_GFH08326.1_2803 HaLaN_03270, GFH08326 Hypothetical protein 0.13 OrthoFinder
lcl|BLLF01000168.1_cds_GFH08550.1_3027 HaLaN_03530, GFH08550 Hypothetical protein 0.09 OrthoFinder
lcl|BLLF01000183.1_cds_GFH08762.1_3239 HaLaN_03780, GFH08762 Hypothetical protein 0.1 OrthoFinder
lcl|BLLF01000229.1_cds_GFH09378.1_3855 HaLaN_04502, GFH09378 Hypothetical protein 0.07 OrthoFinder
lcl|BLLF01000236.1_cds_GFH09459.1_3936 HaLaN_04603, GFH09459 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01000239.1_cds_GFH09488.1_3965 HaLaN_04642, GFH09488 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01000266.1_cds_GFH09825.1_4302 HaLaN_05041, GFH09825 Hypothetical protein 0.16 OrthoFinder
lcl|BLLF01000282.1_cds_GFH10037.1_4514 HaLaN_05280, GFH10037 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01000285.1_cds_GFH10084.1_4561 HaLaN_05335, GFH10084 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01000309.1_cds_GFH10355.1_4832 HaLaN_05654, GFH10355 Hypothetical protein 0.07 OrthoFinder
lcl|BLLF01000312.1_cds_GFH10403.1_4880 HaLaN_05710, GFH10403 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01000325.1_cds_GFH10546.1_5023 HaLaN_05877, GFH10546 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01000325.1_cds_GFH10556.1_5033 HaLaN_05888, GFH10556 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01000327.1_cds_GFH10580.1_5057 HaLaN_05917, GFH10580 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01000380.1_cds_GFH11174.1_5651 HaLaN_06631, GFH11174 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01000447.1_cds_GFH11903.1_6380 HaLaN_07484, GFH11903 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01000499.1_cds_GFH12391.1_6868 HaLaN_08068, GFH12391 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01000505.1_cds_GFH12454.1_6931 HaLaN_08148, GFH12454 Hypothetical protein 0.09 OrthoFinder
lcl|BLLF01000520.1_cds_GFH12612.1_7089 HaLaN_08327, GFH12612 gag-polypeptide of LTR copia-type [Interproscan]. 0.06 OrthoFinder
lcl|BLLF01000531.1_cds_GFH12698.1_7175 HaLaN_08432, GFH12698 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01000568.1_cds_GFH13044.1_7521 HaLaN_08847, GFH13044 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01000635.1_cds_GFH13641.1_8118 HaLaN_09570, GFH13641 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01000659.1_cds_GFH13854.1_8331 HaLaN_09810, GFH13854 Hypothetical protein 0.07 OrthoFinder
lcl|BLLF01000670.1_cds_GFH13944.1_8421 HaLaN_09913, GFH13944 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01000794.1_cds_GFH15008.1_9485 HaLaN_11157, GFH15008 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01000823.1_cds_GFH15230.1_9707 HaLaN_11423, GFH15230 Hypothetical protein 0.06 OrthoFinder
lcl|BLLF01000891.1_cds_GFH15725.1_10202 HaLaN_12008, GFH15725 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01000893.1_cds_GFH15745.1_10222 HaLaN_12035, GFH15745 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01000923.1_cds_GFH15939.1_10416 HaLaN_12269, GFH15939 Hypothetical protein 0.09 OrthoFinder
lcl|BLLF01000924.1_cds_GFH15944.1_10421 HaLaN_12275, GFH15944 Hypothetical protein 0.06 OrthoFinder
lcl|BLLF01001089.1_cds_GFH17053.1_11530 HaLaN_13593, GFH17053 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01001111.1_cds_GFH17202.1_11679 HaLaN_13782, GFH17202 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01001285.1_cds_GFH18332.1_12809 HaLaN_15116, GFH18332 Hypothetical protein 0.09 OrthoFinder
lcl|BLLF01001298.1_cds_GFH18415.1_12892 HaLaN_15217, GFH18415 Hypothetical protein 0.09 OrthoFinder
lcl|BLLF01001336.1_cds_GFH18670.1_13147 HaLaN_15512, GFH18670 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01001361.1_cds_GFH18810.1_13287 HaLaN_15671, GFH18810 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01001366.1_cds_GFH18842.1_13319 HaLaN_15708, GFH18842 Hypothetical protein 0.06 OrthoFinder
lcl|BLLF01001385.1_cds_GFH18955.1_13432 HaLaN_15835, GFH18955 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01001400.1_cds_GFH19065.1_13542 HaLaN_15953, GFH19065 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01001401.1_cds_GFH19068.1_13545 HaLaN_15957, GFH19068 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01001470.1_cds_GFH19480.1_13957 HaLaN_16433, GFH19480 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01001641.1_cds_GFH20469.1_14946 HaLaN_17596, GFH20469 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01001677.1_cds_GFH20671.1_15148 HaLaN_17830, GFH20671 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01001957.1_cds_GFH22049.1_16526 HaLaN_19453, GFH22049 Hypothetical protein 0.06 OrthoFinder
lcl|BLLF01001981.1_cds_GFH22162.1_16639 HaLaN_19581, GFH22162 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01002023.1_cds_GFH22357.1_16834 HaLaN_19811, GFH22357 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01002209.1_cds_GFH23180.1_17657 HaLaN_20755, GFH23180 Hypothetical protein 0.07 OrthoFinder
lcl|BLLF01002553.1_cds_GFH24503.1_18980 HaLaN_22311, GFH24503 Hypothetical protein 0.06 OrthoFinder
lcl|BLLF01002553.1_cds_GFH24504.1_18981 HaLaN_22312, GFH24504 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01002588.1_cds_GFH24623.1_19100 HaLaN_22452, GFH24623 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01002847.1_cds_GFH25554.1_20031 HaLaN_23537, GFH25554 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01003056.1_cds_GFH26206.1_20683 HaLaN_24314, GFH26206 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01003060.1_cds_GFH26221.1_20698 HaLaN_24331, GFH26221 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01003148.1_cds_GFH26499.1_20976 HaLaN_24661, GFH26499 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01003210.1_cds_GFH26697.1_21174 HaLaN_24887, GFH26697 Hypothetical protein 0.08 OrthoFinder
lcl|BLLF01003253.1_cds_GFH26824.1_21301 HaLaN_25037, GFH26824 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01003294.1_cds_GFH26937.1_21414 HaLaN_25171, GFH26937 Hypothetical protein 0.1 OrthoFinder
lcl|BLLF01003316.1_cds_GFH27005.1_21482 HaLaN_25256, GFH27005 Hypothetical protein 0.08 OrthoFinder
lcl|BLLF01003364.1_cds_GFH27143.1_21620 HaLaN_25417, GFH27143 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01003370.1_cds_GFH27160.1_21637 HaLaN_25435, GFH27160 Hypothetical protein 0.11 OrthoFinder
lcl|BLLF01004297.1_cds_GFH29338.1_23815 HaLaN_27980, GFH29338 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01004323.1_cds_GFH29387.1_23864 HaLaN_28034, GFH29387 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01004796.1_cds_GFH30259.1_24736 HaLaN_29077, GFH30259 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01005045.1_cds_GFH30654.1_25131 HaLaN_29543, GFH30654 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01005209.1_cds_GFH30878.1_25355 HaLaN_29807, GFH30878 Hypothetical protein 0.07 OrthoFinder
lcl|BLLF01005341.1_cds_GFH31065.1_25542 HaLaN_30031, GFH31065 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01005373.1_cds_GFH31101.1_25578 HaLaN_30075, GFH31101 Hypothetical protein 0.06 OrthoFinder
lcl|BLLF01005507.1_cds_GFH31287.1_25764 HaLaN_30300, GFH31287 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01005572.1_cds_GFH31367.1_25844 HaLaN_30399, GFH31367 Hypothetical protein 0.07 OrthoFinder
lcl|BLLF01006007.1_cds_GFH31857.1_26334 HaLaN_30977, GFH31857 Hypothetical protein 0.15 OrthoFinder
lcl|BLLF01006757.1_cds_GFH32530.1_27007 HaLaN_31766, GFH32530 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01008101.1_cds_GFH33254.1_27731 HaLaN_32597, GFH33254 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01008205.1_cds_GFH33287.1_27764 HaLaN_32635, GFH33287 Hypothetical protein 0.09 OrthoFinder
lcl|BLLF01008552.1_cds_GFH33425.1_27902 HaLaN_32796, GFH33425 Hypothetical protein 0.06 OrthoFinder
lcl|BLLF01008663.1_cds_GFH33477.1_27954 HaLaN_32856, GFH33477 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01008704.1_cds_GFH33489.1_27966 HaLaN_32870, GFH33489 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0051287 NAD binding IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 24 156
IPR013103 RVT_2 161 243
No external refs found!