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  5. lcl|BLLF01000535.1_cds_GFH12736.1_7213

lcl|BLLF01000535.1_cds_GFH12736.1_7213 (HaLaN_08479, GFH12736)


Aliases : HaLaN_08479, GFH12736

Description : Tetratricopeptide repeat 2 [Interproscan].


Gene families : OG_01_0002326 (OrthoFinder) Phylogenetic Tree(s): OG0002326_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000535.1_cds_GFH12736.1_7213
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Sro313_g114790.1 Contig1770.g15654 Cycle protein 27 homolog 0.01 OrthoFinder
XM_003059048.1 MicpuC2_18029, 18029 Tetratricopeptide repeat 1; Tetratricopeptide repeat... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR013105 TPR_2 76 107
No external refs found!