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  5. lcl|BLLF01000533.1_cds_GFH12725.1_7202

lcl|BLLF01000533.1_cds_GFH12725.1_7202 (HaLaN_08464, GFH12725)


Aliases : HaLaN_08464, GFH12725

Description : Hypothetical protein


Gene families : OG_01_0000016 (OrthoFinder) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000533.1_cds_GFH12725.1_7202
Cluster HCCA: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01000190.1_cds_GFH08861.1_3338 HaLaN_03896, GFH08861 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01001101.1_cds_GFH17132.1_11609 HaLaN_13694, GFH17132 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01001326.1_cds_GFH18602.1_13079 HaLaN_15434, GFH18602 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01001738.1_cds_GFH20984.1_15461 HaLaN_18196, GFH20984 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01003023.1_cds_GFH26107.1_20584 HaLaN_24198, GFH26107 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0034227 tRNA thio-modification IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!