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Aliases : tig00021352_g20674.t1
Description : RNA processing.RNA quality control Exon Junction complex (EJC).core components.Y14 component
Gene families : OG_01_0003118 (OrthoFinder) Phylogenetic Tree(s): OG0003118_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00021351.15 | |
| Cluster | HCCA: Cluster_148 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre12.g526750 | 30792129 | RNA processing.RNA quality control Exon Junction complex... | 0.11 | OrthoFinder | |
| Cz05g06070.t1 | No alias | RNA recognition motif domain [Interproscan]. | 0.05 | OrthoFinder | |
| Dusal.0084s00028.1 | 33201459 | RNA recognition motif domain [Interproscan]. | 0.03 | OrthoFinder | |
| EOD03964 | No alias | RNA recognition motif domain [Interproscan]. | 0.02 | OrthoFinder | |
| EOD16244 | No alias | RNA recognition motif domain [Interproscan]. | 0.02 | OrthoFinder | |
| XM_003059118.1 | MicpuC2_58735, 58735 | RNA recognition motif domain [Interproscan]. | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Enrichment |
| MF | GO:0003712 | transcription coregulator activity | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005643 | nuclear pore | IEP | Enrichment |
| CC | GO:0005667 | transcription regulator complex | IEP | Enrichment |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | Enrichment |
| CC | GO:0005672 | transcription factor TFIIA complex | IEP | Enrichment |
| CC | GO:0005839 | proteasome core complex | IEP | Enrichment |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Enrichment |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006457 | protein folding | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| BP | GO:0008380 | RNA splicing | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| CC | GO:0016272 | prefoldin complex | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Enrichment |
| BP | GO:0018208 | peptidyl-proline modification | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Enrichment |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | Enrichment |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 81 | 129 |
| No external refs found! |