- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : HaLaN_08327, GFH12612
Description : gag-polypeptide of LTR copia-type [Interproscan].
Gene families : OG_01_0000004 (OrthoFinder) Phylogenetic Tree(s): OG0000004_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01000520.1_cds_GFH12612.1_7089 | |
| Cluster | HCCA: Cluster_102 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| lcl|BLLF01000003.1_cds_GFH05616.1_93 | HaLaN_00111, GFH05616 | Hypothetical protein | 0.04 | OrthoFinder | |
| lcl|BLLF01000035.1_cds_GFH06376.1_853 | HaLaN_00996, GFH06376 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01000084.1_cds_GFH07275.1_1752 | HaLaN_02057, GFH07275 | Hypothetical protein | 0.04 | OrthoFinder | |
| lcl|BLLF01000139.1_cds_GFH08124.1_2601 | HaLaN_03039, GFH08124 | Hypothetical protein | 0.04 | OrthoFinder | |
| lcl|BLLF01000168.1_cds_GFH08550.1_3027 | HaLaN_03530, GFH08550 | Hypothetical protein | 0.04 | OrthoFinder | |
| lcl|BLLF01000229.1_cds_GFH09378.1_3855 | HaLaN_04502, GFH09378 | Hypothetical protein | 0.04 | OrthoFinder | |
| lcl|BLLF01000239.1_cds_GFH09488.1_3965 | HaLaN_04642, GFH09488 | Hypothetical protein | 0.04 | OrthoFinder | |
| lcl|BLLF01000247.1_cds_GFH09609.1_4086 | HaLaN_04785, GFH09609 | Hypothetical protein | 0.02 | OrthoFinder | |
| lcl|BLLF01000266.1_cds_GFH09825.1_4302 | HaLaN_05041, GFH09825 | Hypothetical protein | 0.04 | OrthoFinder | |
| lcl|BLLF01000282.1_cds_GFH10037.1_4514 | HaLaN_05280, GFH10037 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01000285.1_cds_GFH10084.1_4561 | HaLaN_05335, GFH10084 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01000290.1_cds_GFH10142.1_4619 | HaLaN_05403, GFH10142 | Hypothetical protein | 0.02 | OrthoFinder | |
| lcl|BLLF01000309.1_cds_GFH10355.1_4832 | HaLaN_05654, GFH10355 | Hypothetical protein | 0.02 | OrthoFinder | |
| lcl|BLLF01000325.1_cds_GFH10546.1_5023 | HaLaN_05877, GFH10546 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01000325.1_cds_GFH10556.1_5033 | HaLaN_05888, GFH10556 | Hypothetical protein | 0.04 | OrthoFinder | |
| lcl|BLLF01000425.1_cds_GFH11678.1_6155 | HaLaN_07217, GFH11678 | Hypothetical protein | 0.05 | OrthoFinder | |
| lcl|BLLF01000447.1_cds_GFH11903.1_6380 | HaLaN_07484, GFH11903 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01000499.1_cds_GFH12391.1_6868 | HaLaN_08068, GFH12391 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01000505.1_cds_GFH12454.1_6931 | HaLaN_08148, GFH12454 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01000546.1_cds_GFH12852.1_7329 | HaLaN_08616, GFH12852 | Reverse transcriptase Ty1/copia-type domain-containing protein | 0.06 | OrthoFinder | |
| lcl|BLLF01000644.1_cds_GFH13723.1_8200 | HaLaN_09661, GFH13723 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01000670.1_cds_GFH13944.1_8421 | HaLaN_09913, GFH13944 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01000747.1_cds_GFH14611.1_9088 | HaLaN_10701, GFH14611 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01000806.1_cds_GFH15102.1_9579 | HaLaN_11268, GFH15102 | Hypothetical protein | 0.04 | OrthoFinder | |
| lcl|BLLF01000929.1_cds_GFH15978.1_10455 | HaLaN_12317, GFH15978 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01001020.1_cds_GFH16597.1_11074 | HaLaN_13041, GFH16597 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01001259.1_cds_GFH18181.1_12658 | HaLaN_14937, GFH18181 | Hypothetical protein | 0.01 | OrthoFinder | |
| lcl|BLLF01001285.1_cds_GFH18332.1_12809 | HaLaN_15116, GFH18332 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01001298.1_cds_GFH18415.1_12892 | HaLaN_15217, GFH18415 | Hypothetical protein | 0.04 | OrthoFinder | |
| lcl|BLLF01001310.1_cds_GFH18503.1_12980 | HaLaN_15321, GFH18503 | Hypothetical protein | 0.01 | OrthoFinder | |
| lcl|BLLF01001361.1_cds_GFH18810.1_13287 | HaLaN_15671, GFH18810 | Hypothetical protein | 0.04 | OrthoFinder | |
| lcl|BLLF01001366.1_cds_GFH18842.1_13319 | HaLaN_15708, GFH18842 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01001385.1_cds_GFH18955.1_13432 | HaLaN_15835, GFH18955 | Hypothetical protein | 0.04 | OrthoFinder | |
| lcl|BLLF01001388.1_cds_GFH18984.1_13461 | HaLaN_15868, GFH18984 | Hypothetical protein | 0.02 | OrthoFinder | |
| lcl|BLLF01001400.1_cds_GFH19065.1_13542 | HaLaN_15953, GFH19065 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01001400.1_cds_GFH19066.1_13543 | HaLaN_15954, GFH19066 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01001401.1_cds_GFH19068.1_13545 | HaLaN_15957, GFH19068 | Hypothetical protein | 0.05 | OrthoFinder | |
| lcl|BLLF01001501.1_cds_GFH19681.1_14158 | HaLaN_16664, GFH19681 | Hypothetical protein | 0.04 | OrthoFinder | |
| lcl|BLLF01001677.1_cds_GFH20671.1_15148 | HaLaN_17830, GFH20671 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01001829.1_cds_GFH21440.1_15917 | HaLaN_18747, GFH21440 | Hypothetical protein | 0.01 | OrthoFinder | |
| lcl|BLLF01001839.1_cds_GFH21487.1_15964 | HaLaN_18802, GFH21487 | Hypothetical protein | 0.01 | OrthoFinder | |
| lcl|BLLF01001839.1_cds_GFH21488.1_15965 | HaLaN_18803, GFH21488 | Hypothetical protein | 0.04 | OrthoFinder | |
| lcl|BLLF01001951.1_cds_GFH22022.1_16499 | HaLaN_19421, GFH22022 | Hypothetical protein | 0.01 | OrthoFinder | |
| lcl|BLLF01002023.1_cds_GFH22357.1_16834 | HaLaN_19811, GFH22357 | Hypothetical protein | 0.01 | OrthoFinder | |
| lcl|BLLF01002127.1_cds_GFH22808.1_17285 | HaLaN_20324, GFH22808 | Hypothetical protein | 0.04 | OrthoFinder | |
| lcl|BLLF01002209.1_cds_GFH23180.1_17657 | HaLaN_20755, GFH23180 | Hypothetical protein | 0.02 | OrthoFinder | |
| lcl|BLLF01002368.1_cds_GFH23809.1_18286 | HaLaN_21490, GFH23809 | Hypothetical protein | 0.05 | OrthoFinder | |
| lcl|BLLF01002407.1_cds_GFH23964.1_18441 | HaLaN_21670, GFH23964 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01002504.1_cds_GFH24324.1_18801 | HaLaN_22098, GFH24324 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01002553.1_cds_GFH24503.1_18980 | HaLaN_22311, GFH24503 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01002553.1_cds_GFH24504.1_18981 | HaLaN_22312, GFH24504 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01002598.1_cds_GFH24662.1_19139 | HaLaN_22498, GFH24662 | Hypothetical protein | 0.04 | OrthoFinder | |
| lcl|BLLF01002964.1_cds_GFH25932.1_20409 | HaLaN_23984, GFH25932 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01003056.1_cds_GFH26206.1_20683 | HaLaN_24314, GFH26206 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01003060.1_cds_GFH26221.1_20698 | HaLaN_24331, GFH26221 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01003148.1_cds_GFH26499.1_20976 | HaLaN_24661, GFH26499 | Hypothetical protein | 0.05 | OrthoFinder | |
| lcl|BLLF01003210.1_cds_GFH26697.1_21174 | HaLaN_24887, GFH26697 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01003232.1_cds_GFH26762.1_21239 | HaLaN_24965, GFH26762 | Hypothetical protein | 0.02 | OrthoFinder | |
| lcl|BLLF01003294.1_cds_GFH26937.1_21414 | HaLaN_25171, GFH26937 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01003316.1_cds_GFH27005.1_21482 | HaLaN_25256, GFH27005 | Hypothetical protein | 0.04 | OrthoFinder | |
| lcl|BLLF01003370.1_cds_GFH27160.1_21637 | HaLaN_25435, GFH27160 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01004796.1_cds_GFH30259.1_24736 | HaLaN_29077, GFH30259 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01005045.1_cds_GFH30654.1_25131 | HaLaN_29543, GFH30654 | Hypothetical protein | 0.04 | OrthoFinder | |
| lcl|BLLF01005373.1_cds_GFH31101.1_25578 | HaLaN_30075, GFH31101 | Hypothetical protein | 0.04 | OrthoFinder | |
| lcl|BLLF01005407.1_cds_GFH31158.1_25635 | HaLaN_30141, GFH31158 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01005507.1_cds_GFH31287.1_25764 | HaLaN_30300, GFH31287 | Hypothetical protein | 0.03 | OrthoFinder | |
| lcl|BLLF01005572.1_cds_GFH31367.1_25844 | HaLaN_30399, GFH31367 | Hypothetical protein | 0.04 | OrthoFinder | |
| lcl|BLLF01005851.1_cds_GFH31700.1_26177 | HaLaN_30792, GFH31700 | Hypothetical protein | 0.04 | OrthoFinder | |
| lcl|BLLF01006007.1_cds_GFH31857.1_26334 | HaLaN_30977, GFH31857 | Hypothetical protein | 0.04 | OrthoFinder | |
| lcl|BLLF01008205.1_cds_GFH33287.1_27764 | HaLaN_32635, GFH33287 | Hypothetical protein | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004814 | arginine-tRNA ligase activity | IEP | Enrichment |
| BP | GO:0006420 | arginyl-tRNA aminoacylation | IEP | Enrichment |
| BP | GO:0006810 | transport | IEP | Enrichment |
| BP | GO:0006811 | ion transport | IEP | Enrichment |
| BP | GO:0006812 | cation transport | IEP | Enrichment |
| MF | GO:0008324 | cation transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015075 | ion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015298 | solute:cation antiporter activity | IEP | Enrichment |
| MF | GO:0015299 | solute:proton antiporter activity | IEP | Enrichment |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0030001 | metal ion transport | IEP | Enrichment |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0051179 | localization | IEP | Enrichment |
| BP | GO:0051234 | establishment of localization | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |