lcl|BLLF01000509.1_cds_GFH12491.1_6968 (HaLaN_08195, GFH12491)

Aliases : HaLaN_08195, GFH12491

Description : Histone H1/5

Gene families : OG_01_0000394 (OrthoFinder) Phylogenetic Tree(s): OG0000394_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|BLLF01000509.1_cds_GFH12491.1_6968
Cluster	HCCA: Cluster_114

Target	Alias	Description	ECC score	Gene Family Method
Cre13.g567450	30784737, HON1	Chromatin organisation.histones.H1 linker histone	0.01	OrthoFinder
Dusal.0152s00004.1	33186207	Linker histone H1/H5, domain H15 [Interproscan].	0.01	OrthoFinder
Dusal.0165s00001.1	33193357	Linker histone H1/H5, domain H15 [Interproscan].	0.01	OrthoFinder
Sro178_g078230.1	Contig275.g3548	Linker histone H1 and H5 family	0.01	OrthoFinder
lcl\|BLLF01000486.1_cds_GFH12281.1_6758	HaLaN_07935, GFH12281	H15 domain-containing protein	0.02	OrthoFinder
lcl\|BLLF01002091.1_cds_GFH22655.1_17132	HaLaN_20152, GFH22655	Histone H1/5	0.03	OrthoFinder
lcl\|LHPG02000024.1_cds_PRW20387.1_5599	PRW20387	Histone H1	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006334	nucleosome assembly	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0034728	nucleosome organization	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065004	protein-DNA complex assembly	None	Extended
BP	GO:0071824	protein-DNA complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004061	arylformamidase activity	IEP	Enrichment
BP	GO:0006359	regulation of transcription by RNA polymerase III	IEP	Enrichment
BP	GO:0006568	tryptophan metabolic process	IEP	Enrichment
BP	GO:0006569	tryptophan catabolic process	IEP	Enrichment
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Enrichment
BP	GO:0006586	indolalkylamine metabolic process	IEP	Enrichment
BP	GO:0007154	cell communication	IEP	Enrichment
BP	GO:0009063	cellular amino acid catabolic process	IEP	Enrichment
BP	GO:0009072	aromatic amino acid family metabolic process	IEP	Enrichment
BP	GO:0009074	aromatic amino acid family catabolic process	IEP	Enrichment
BP	GO:0009308	amine metabolic process	IEP	Enrichment
BP	GO:0009310	amine catabolic process	IEP	Enrichment
BP	GO:0009890	negative regulation of biosynthetic process	IEP	Enrichment
BP	GO:0009892	negative regulation of metabolic process	IEP	Enrichment
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	Enrichment
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Enrichment
BP	GO:0016054	organic acid catabolic process	IEP	Enrichment
BP	GO:0016480	negative regulation of transcription by RNA polymerase III	IEP	Enrichment
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Enrichment
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Enrichment
BP	GO:0019439	aromatic compound catabolic process	IEP	Enrichment
BP	GO:0019441	tryptophan catabolic process to kynurenine	IEP	Enrichment
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	Enrichment
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	Enrichment
BP	GO:0042180	cellular ketone metabolic process	IEP	Enrichment
BP	GO:0042402	cellular biogenic amine catabolic process	IEP	Enrichment
BP	GO:0042430	indole-containing compound metabolic process	IEP	Enrichment
BP	GO:0042436	indole-containing compound catabolic process	IEP	Enrichment
BP	GO:0042537	benzene-containing compound metabolic process	IEP	Enrichment
BP	GO:0044106	cellular amine metabolic process	IEP	Enrichment
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Enrichment
BP	GO:0044282	small molecule catabolic process	IEP	Enrichment
BP	GO:0045892	negative regulation of transcription, DNA-templated	IEP	Enrichment
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	IEP	Enrichment
BP	GO:0046218	indolalkylamine catabolic process	IEP	Enrichment
BP	GO:0046395	carboxylic acid catabolic process	IEP	Enrichment
BP	GO:0046700	heterocycle catabolic process	IEP	Enrichment
BP	GO:0048519	negative regulation of biological process	IEP	Enrichment
BP	GO:0048523	negative regulation of cellular process	IEP	Enrichment
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	IEP	Enrichment
BP	GO:0051253	negative regulation of RNA metabolic process	IEP	Enrichment
BP	GO:0070189	kynurenine metabolic process	IEP	Enrichment
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Enrichment
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Enrichment
BP	GO:1901606	alpha-amino acid catabolic process	IEP	Enrichment
BP	GO:1902679	negative regulation of RNA biosynthetic process	IEP	Enrichment
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	IEP	Enrichment
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005818	Histone_H1/H5_H15	25	92

External Links

No external refs found!

lcl|BLLF01000509.1_cds_GFH12491.1_6968 (HaLaN_08195, GFH12491)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation