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  5. Cpa|evm.model.tig00021350.16

Cpa|evm.model.tig00021350.16 (tig00021350_g20633.t1)


Aliases : tig00021350_g20633.t1

Description : Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT1 alpha subunit


Gene families : OG_01_0002508 (OrthoFinder) Phylogenetic Tree(s): OG0002508_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021350.16
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Cre10.g439100 30790162, CCT1 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder
Cz06g06090.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
Dusal.1206s00002.1 33197631 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
EOD21347 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
Sro1027_g233030.1 Contig109.g1254 T-complex protein 1 subunit alpha (Fragment) 0.03 OrthoFinder
Vocar.0001s1299.1 32885026 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
XM_002499911.1 MICPUN_90096, 90096 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.06 OrthoFinder
XM_003055156.1 MicpuC2_46385, 46385 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000028.1_cds_PRW05817.1_5977 PRW05817 T-complex 1 subunit alpha 0.03 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494500.1_3030 KAA8494500 T-complex protein 1 subunit alpha 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 27 531
No external refs found!