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  5. lcl|BLLF01000459.1_cds_GFH12019.1_6496

lcl|BLLF01000459.1_cds_GFH12019.1_6496 (HaLaN_07636, GFH12019)


Aliases : HaLaN_07636, GFH12019

Description : Putative cell division protease ftsH, chloroplastic


Gene families : OG_01_0000075 (OrthoFinder) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000459.1_cds_GFH12019.1_6496
Cluster HCCA: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00022075.42 tig00022075_g23603.t1 ATP-dependent zinc metalloprotease FTSH, chloroplastic... 0.01 OrthoFinder
Cre07.g352350 30774541 ATP-dependent zinc metalloprotease FTSH, chloroplastic... 0.03 OrthoFinder
Cz02g01040.t1 No alias Peptidase M41, FtsH extracellular; AAA ATPase, AAA+ lid... 0.02 OrthoFinder
Cz05g27050.t1 No alias AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... 0.01 OrthoFinder
Cz05g33210.t1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.02 OrthoFinder
Cz13g18040.t1 No alias AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... 0.02 OrthoFinder
TPCG00990.1 No alias ATPase, AAA-type, core; Peptidase M41; AAA ATPase, AAA+... 0.02 OrthoFinder
Transcript_contig_54885 54885 Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... 0.01 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499595.1_8548 KAA8499595 ATP-dependent zinc metalloprotease FtsH 3 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Enrichment
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006098 pentose-phosphate shunt IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006740 NADPH regeneration IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0051156 glucose 6-phosphate metabolic process IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 50 92
No external refs found!