1. Home
  2. Species
  3. Haematococcus lacustris
  4. Sequence
  5. lcl|BLLF01000446.1_cds_GFH11894.1_6371

lcl|BLLF01000446.1_cds_GFH11894.1_6371 (HaLaN_07472, GFH11894)


Aliases : HaLaN_07472, GFH11894

Description : Origin recognition complex subunit 1


Gene families : OG_01_0000811 (OrthoFinder) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000446.1_cds_GFH11894.1_6371
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021070.70 tig00021070_g17875.t1 Cell cycle.interphase.DNA replication.preinitiation.CDC6... 0.03 OrthoFinder
Cre06.g292850 30778792, CDC6 No description available 0.03 OrthoFinder
Cre10.g455600 30789958, ORC1 Cell cycle.interphase.DNA... 0.07 OrthoFinder
Cz11g11020.t1 No alias Cdc6, C-terminal; AAA+ ATPase domain [Interproscan]. 0.03 OrthoFinder
EOD12119 No alias Bromo adjacent homology (BAH) domain; ATPase, AAA-type,... 0.03 OrthoFinder
EOD31487 No alias Zinc finger, PHD-finger [Interproscan]. 0.04 OrthoFinder
OT_04G01060.1 No alias Methyl-CpG DNA binding; AAA+ ATPase domain; Cdc6,... 0.02 OrthoFinder
OT_04G05240.1 No alias Zinc finger, PHD-finger; Bromo adjacent homology (BAH)... 0.03 OrthoFinder
PTI_01G02210.1 No alias AAA+ ATPase domain [Interproscan]. 0.02 OrthoFinder
Sro395_g133970.1 Contig4272.g32316 Complex subunit 0.03 OrthoFinder
TP06G00210.1 No alias ATPase, AAA-type, core [Interproscan]. 0.02 OrthoFinder
TP10G03100.1 No alias ATPase, AAA-type, core [Interproscan]. 0.04 OrthoFinder
Transcript_contig_55058 55058 Zinc finger, PHD-finger; Bromo adjacent homology (BAH)... 0.04 OrthoFinder
Vocar.0030s0099.1 32894601 Zinc finger, PHD-finger; ATPase, AAA-type, core; AAA lid... 0.05 OrthoFinder
XM_002501862.1 MICPUN_81192, 81192 Cdc6, C-terminal; AAA+ ATPase domain [Interproscan]. 0.03 OrthoFinder
XM_002506404.1 MICPUN_88660, 88660 AAA lid domain; Zinc finger, PHD-finger; ATPase,... 0.02 OrthoFinder
XM_003057583.1 MicpuC2_2525, 2525 Cdc6, C-terminal; Orc1-like, AAA ATPase domain [Interproscan]. 0.02 OrthoFinder
XM_003063314.1 MicpuC2_36249, 36249 AAA lid domain; Zinc finger, PHD-finger; Orc1-like, AAA... 0.01 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61222.1_121 PRW61222 Origin recognition complex subunit 1 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 185 323
No external refs found!