lcl|BLLF01000413.1_cds_GFH11540.1_6017 (HaLaN_07053, GFH11540)

Aliases : HaLaN_07053, GFH11540

Description : Geranylgeranyl pyrophosphate synthase GGPPS1

Gene families : OG_01_0001967 (OrthoFinder) Phylogenetic Tree(s): OG0001967_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|BLLF01000413.1_cds_GFH11540.1_6017
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
Cre12.g484200	30791982, PPS2	Secondary metabolism.terpenoids.methylerythritol...	0.03	OrthoFinder
EOD26982	No alias	Geranylgeranyl pyrophosphate synthase [Ensembl].	0.04	OrthoFinder
OT_12G01210.1	No alias	Polyprenyl synthetase [Interproscan].	0.02	OrthoFinder
PTI_04G03070.1	No alias	Polyprenyl synthetase [Interproscan].	0.02	OrthoFinder
Sro379_g130420.1	Contig3398.g26559	Heterodimeric geranylgeranyl pyrophosphate synthase...	0.03	OrthoFinder
TP03G04110.1	No alias	Polyprenyl synthetase [Interproscan].	0.02	OrthoFinder
XM_002503601.1	MICPUN_104883, 104883	Geranyl pyrophosphate synthase (GGPS1)	0.02	OrthoFinder
XM_003054907.1	MicpuC2_50196, 50196	Geranyl pyrophosphate synthase (GGPS1)	0.02	OrthoFinder
lcl\|LHPG02000014.1_cds_PRW39174.1_2776	PRW39174	Geranylgeranyl diphosphate synthase	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	IEA	Interproscan
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Enrichment
MF	GO:0004743	pyruvate kinase activity	IEP	Enrichment
BP	GO:0006090	pyruvate metabolic process	IEP	Enrichment
BP	GO:0006096	glycolytic process	IEP	Enrichment
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	Enrichment
BP	GO:0006721	terpenoid metabolic process	IEP	Enrichment
BP	GO:0006757	ATP generation from ADP	IEP	Enrichment
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	Enrichment
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	Enrichment
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	Enrichment
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	Enrichment
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	Enrichment
BP	GO:0016052	carbohydrate catabolic process	IEP	Enrichment
BP	GO:0016114	terpenoid biosynthetic process	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Enrichment
MF	GO:0016744	transketolase or transaldolase activity	IEP	Enrichment
MF	GO:0030955	potassium ion binding	IEP	Enrichment
MF	GO:0031420	alkali metal ion binding	IEP	Enrichment
BP	GO:0046031	ADP metabolic process	IEP	Enrichment
MF	GO:0046429	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity	IEP	Enrichment
BP	GO:0046939	nucleotide phosphorylation	IEP	Enrichment
MF	GO:0052592	oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor	IEP	Enrichment
BP	GO:0055114	obsolete oxidation-reduction process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000092	Polyprenyl_synt	25	97

External Links

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