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  5. lcl|BLLF01000405.1_cds_GFH11454.1_5931

lcl|BLLF01000405.1_cds_GFH11454.1_5931 (HaLaN_06953, GFH11454)


Aliases : HaLaN_06953, GFH11454

Description : Ribosomal protein L30, N-terminal [Interproscan].


Gene families : OG_01_0002109 (OrthoFinder) Phylogenetic Tree(s): OG0002109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000405.1_cds_GFH11454.1_5931
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020909.42 tig00020909_g15363.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder
Cre12.g537800 30791776, RPL7 Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder
Dusal.1371s00001.1 33191881 Ribosomal protein L30, ferredoxin-like fold domain;... 0.03 OrthoFinder
EOD11472 No alias Ribosomal protein L30, N-terminal; Ribosomal protein... 0.03 OrthoFinder
EOD41169 No alias Ribosomal protein L30, N-terminal; Ribosomal protein... 0.03 OrthoFinder
OT_03G01610.1 No alias Ribosomal protein L30, N-terminal; Ribosomal protein... 0.03 OrthoFinder
PTI_15G01150.1 No alias Ribosomal protein L30, ferredoxin-like fold domain... 0.02 OrthoFinder
PTI_19G01830.1 No alias Ribosomal protein L30, ferredoxin-like fold domain;... 0.05 OrthoFinder
Sro264_g102550.1 Contig921.g9681 60S ribosomal protein L7 0.06 OrthoFinder
SymbC1.scaffold4779.1 4779.1 Ribosomal protein L30, ferredoxin-like fold domain;... 0.02 OrthoFinder
SymbC1.scaffold680.2 680.2 Ribosomal protein L30, ferredoxin-like fold domain;... 0.02 OrthoFinder
TP02G06700.1 No alias Ribosomal protein L30, ferredoxin-like fold domain;... 0.03 OrthoFinder
TP10G01960.1 No alias Hypothetical protein 0.03 OrthoFinder
XM_002500889.1 MICPUN_106801, 106801 Ribosomal protein L30, ferredoxin-like fold domain;... 0.05 OrthoFinder
lcl|LHPG02000024.1_cds_PRW20371.1_5557 PRW20371 60S ribosomal L7-2 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Enrichment
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005672 transcription factor TFIIA complex IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006383 transcription by RNA polymerase III IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006417 regulation of translation IEP Enrichment
BP GO:0006448 regulation of translational elongation IEP Enrichment
BP GO:0006449 regulation of translational termination IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0009891 positive regulation of biosynthetic process IEP Enrichment
BP GO:0009893 positive regulation of metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
BP GO:0010628 positive regulation of gene expression IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
BP GO:0031325 positive regulation of cellular metabolic process IEP Enrichment
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0034248 regulation of cellular amide metabolic process IEP Enrichment
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043022 ribosome binding IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0045727 positive regulation of translation IEP Enrichment
BP GO:0045901 positive regulation of translational elongation IEP Enrichment
BP GO:0045905 positive regulation of translational termination IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0048518 positive regulation of biological process IEP Enrichment
BP GO:0048522 positive regulation of cellular process IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051130 positive regulation of cellular component organization IEP Enrichment
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051247 positive regulation of protein metabolic process IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1905354 exoribonuclease complex IEP Enrichment
InterPro domains Description Start Stop
IPR012988 Ribosomal_L30_N 6 70
No external refs found!