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  5. lcl|BLLF01000402.1_cds_GFH11427.1_5904

lcl|BLLF01000402.1_cds_GFH11427.1_5904 (HaLaN_06920, GFH11427)


Aliases : HaLaN_06920, GFH11427

Description : Retrovirus-related Pol polyprotein LINE-1


Gene families : OG_01_0000304 (OrthoFinder) Phylogenetic Tree(s): OG0000304_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000402.1_cds_GFH11427.1_5904
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01000003.1_cds_GFH05599.1_76 HaLaN_00087, GFH05599 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01000007.1_cds_GFH05743.1_220 HaLaN_00253, GFH05743 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01000141.1_cds_GFH08150.1_2627 HaLaN_03065, GFH08150 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01000188.1_cds_GFH08847.1_3324 HaLaN_03878, GFH08847 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01000189.1_cds_GFH08856.1_3333 HaLaN_03889, GFH08856 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01000245.1_cds_GFH09580.1_4057 HaLaN_04755, GFH09580 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01000445.1_cds_GFH11881.1_6358 HaLaN_07459, GFH11881 Hypothetical protein 0.07 OrthoFinder
lcl|BLLF01000971.1_cds_GFH16265.1_10742 HaLaN_12651, GFH16265 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01001147.1_cds_GFH17432.1_11909 HaLaN_14070, GFH17432 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01001379.1_cds_GFH18916.1_13393 HaLaN_15791, GFH18916 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01001488.1_cds_GFH19590.1_14067 HaLaN_16556, GFH19590 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01001640.1_cds_GFH20463.1_14940 HaLaN_17588, GFH20463 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01001940.1_cds_GFH21961.1_16438 HaLaN_19353, GFH21961 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01002192.1_cds_GFH23100.1_17577 HaLaN_20659, GFH23100 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01002380.1_cds_GFH23855.1_18332 HaLaN_21543, GFH23855 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01002643.1_cds_GFH24829.1_19306 HaLaN_22692, GFH24829 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01003325.1_cds_GFH27033.1_21510 HaLaN_25289, GFH27033 Hypothetical protein 0.07 OrthoFinder
lcl|BLLF01003441.1_cds_GFH27349.1_21826 HaLaN_25654, GFH27349 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01004769.1_cds_GFH30216.1_24693 HaLaN_29022, GFH30216 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01005787.1_cds_GFH31636.1_26113 HaLaN_30713, GFH31636 Hypothetical protein 0.06 OrthoFinder
lcl|BLLF01006088.1_cds_GFH31938.1_26415 HaLaN_31072, GFH31938 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01006835.1_cds_GFH32582.1_27059 HaLaN_31826, GFH32582 Hypothetical protein 0.1 OrthoFinder
lcl|BLLF01007141.1_cds_GFH32792.1_27269 HaLaN_32073, GFH32792 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01008155.1_cds_GFH33271.1_27748 HaLaN_32616, GFH33271 Retrovirus-related Pol polyprotein from type-2... 0.06 OrthoFinder
lcl|BLLF01008414.1_cds_GFH33365.1_27842 HaLaN_32729, GFH33365 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Enrichment
CC GO:1905354 exoribonuclease complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!