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Aliases : HaLaN_06848, GFH11363
Description : PCI domain-containing protein
Gene families : OG_01_0003859 (OrthoFinder) Phylogenetic Tree(s): OG0003859_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01000396.1_cds_GFH11363.1_5840 | |
| Cluster | HCCA: Cluster_41 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00021348.57 | tig00021348_g20560.t1 | Protein degradation.26S proteasome.regulatory... | 0.02 | OrthoFinder | |
| Cre14.g632775 | 30776081 | Protein degradation.26S proteasome.regulatory... | 0.02 | OrthoFinder | |
| Cz02g18120.t1 | No alias | Proteasome component (PCI) domain; 26S proteasome... | 0.04 | OrthoFinder | |
| PTI_01G08230.1 | No alias | Proteasome component (PCI) domain; 26S proteasome... | 0.03 | OrthoFinder | |
| Sro208_g087140.1 | Contig351.g4785 | ATPase regulatory subunit 12 | 0.04 | OrthoFinder | |
| TP18G00410.1 | No alias | 26S proteasome regulatory subunit RPN5, C-terminal... | 0.02 | OrthoFinder | |
| XM_002502763.1 | MICPUN_108413, 108413 | Proteasome component (PCI) domain; 26S proteasome... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003743 | translation initiation factor activity | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005509 | calcium ion binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| CC | GO:0005839 | proteasome core complex | IEP | Enrichment |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Enrichment |
| CC | GO:0009521 | photosystem | IEP | Enrichment |
| CC | GO:0009523 | photosystem II | IEP | Enrichment |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Enrichment |
| BP | GO:0015979 | photosynthesis | IEP | Enrichment |
| MF | GO:0016597 | amino acid binding | IEP | Enrichment |
| MF | GO:0016743 | carboxyl- or carbamoyltransferase activity | IEP | Enrichment |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| BP | GO:0034220 | ion transmembrane transport | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| MF | GO:0043177 | organic acid binding | IEP | Enrichment |
| MF | GO:0045182 | translation regulator activity | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Enrichment |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Enrichment |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Enrichment |
| BP | GO:0098655 | cation transmembrane transport | IEP | Enrichment |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Enrichment |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Enrichment |
| BP | GO:1902600 | proton transmembrane transport | IEP | Enrichment |
| CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR040896 | RPN5_C | 402 | 431 |
| No external refs found! |