lcl|BLLF01000394.1_cds_GFH11345.1_5822 (HaLaN_06828, GFH11345)


Aliases : HaLaN_06828, GFH11345

Description : Lysyl-tRNA synthetase


Gene families : OG_01_0001772 (OrthoFinder) Phylogenetic Tree(s): OG0001772_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000394.1_cds_GFH11345.1_5822
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020510.54 tig00020510_g9835.t1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder
Cpa|evm.model.tig00020510.55 tig00020510_g9836.t1 Lysine--tRNA ligase OS=Oryza sativa subsp. japonica 0.03 OrthoFinder
Cre03.g160500 30788286 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder
Cz01g23090.t1 No alias Aminoacyl-tRNA synthetase, class II (D/K/N) [Interproscan]. 0.02 OrthoFinder
Cz01g23100.t1 No alias OB-fold nucleic acid binding domain, AA-tRNA... 0.03 OrthoFinder
Sro1601_g285200.1 Contig4269.g32304 Lysine--tRNA ligase 0.01 OrthoFinder
TP08G03930.1 No alias OB-fold nucleic acid binding domain, AA-tRNA... 0.02 OrthoFinder
XM_002505728.1 MICPUN_103834, 103834 OB-fold nucleic acid binding domain, AA-tRNA... 0.02 OrthoFinder
XM_003063769.1 MicpuC2_53494, 53494 OB-fold nucleic acid binding domain, AA-tRNA... 0.03 OrthoFinder
lcl|LHPG02000023.1_cds_PRW20466.1_5481 PRW20466 Lysine-tRNA ligase isoform X2 isoform A 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003937 IMP cyclohydrolase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006164 purine nucleotide biosynthetic process IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0072522 purine-containing compound biosynthetic process IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR004365 NA-bd_OB_tRNA 73 154
IPR004364 Aa-tRNA-synt_II 170 464
No external refs found!