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  5. lcl|BLLF01000394.1_cds_GFH11342.1_5819

lcl|BLLF01000394.1_cds_GFH11342.1_5819 (HaLaN_06825, GFH11342)


Aliases : HaLaN_06825, GFH11342

Description : RNA recognition motif domain [Interproscan].


Gene families : OG_01_0000350 (OrthoFinder) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000394.1_cds_GFH11342.1_5819
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Dusal.0100s00014.1 33202467 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
Vocar.0005s0221.1 32884071 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000045.1_cds_GFH06580.1_1057 HaLaN_01233, GFH06580 RNA-binding protein Musashi 1 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
CC GO:0030173 integral component of Golgi membrane IEP Enrichment
CC GO:0031228 intrinsic component of Golgi membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 123 171
No external refs found!