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  5. lcl|BLLF01000389.1_cds_GFH11275.1_5752

lcl|BLLF01000389.1_cds_GFH11275.1_5752 (HaLaN_06750, GFH11275)


Aliases : HaLaN_06750, GFH11275

Description : Mu1-adaptin


Gene families : OG_01_0000738 (OrthoFinder) Phylogenetic Tree(s): OG0000738_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000389.1_cds_GFH11275.1_5752
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021168.13 tig00021168_g19079.t1 AP-2 complex subunit mu OS=Arabidopsis thaliana 0.02 OrthoFinder
EOD10147 No alias Apm2, medium subunit of the adaptin 2 complex [Ensembl]. 0.01 OrthoFinder
EOD24729 No alias Apm2, medium subunit of the adaptin 2 complex [Ensembl]. 0.01 OrthoFinder
EOD33288 No alias Adaptor protein 1 medium subunit [Ensembl]. 0.02 OrthoFinder
EOD33289 No alias Adaptor protein 1 medium subunit [Ensembl]. 0.02 OrthoFinder
Sro1741_g294650.1 Contig4311.g32511 AP-1 complex subunit mu 0.01 OrthoFinder
Sro643_g180290.1 Contig2037.g17507 AP-1 complex subunit mu 0.01 OrthoFinder
TP03G02860.1 No alias Mu homology domain; AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
TP14G03430.1 No alias AP complex, mu/sigma subunit; Mu homology domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_54314 54314 AP complex, mu/sigma subunit; Mu homology domain [Interproscan]. 0.01 OrthoFinder
Vocar.0052s0018.1 32897683 AP complex, mu/sigma subunit; Mu homology domain [Interproscan]. 0.02 OrthoFinder
XM_002506457.1 MICPUN_109548, 109548 AP complex, mu/sigma subunit; Mu homology domain [Interproscan]. 0.03 OrthoFinder
XM_003063463.1 MicpuC2_29751, 29751 Mu homology domain; AP complex, mu/sigma subunit [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000006.1_cds_PRW57884.1_8711 PRW57884 AP-2 complex subunit mu 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498595.1_7548 KAA8498595 AP-1 complex subunit mu 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 3 123
No external refs found!