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  5. lcl|BLLF01000380.1_cds_GFH11171.1_5648

lcl|BLLF01000380.1_cds_GFH11171.1_5648 (HaLaN_06627, GFH11171)


Aliases : HaLaN_06627, GFH11171

Description : Ribosomal protein S18


Gene families : OG_01_0002223 (OrthoFinder) Phylogenetic Tree(s): OG0002223_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000380.1_cds_GFH11171.1_5648
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Cre06.g272950 30778811, RPS18 Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder
EOD07550 No alias Ribosomal protein S13 [Interproscan]. 0.03 OrthoFinder
EOD24485 No alias Ribosomal protein S13 [Interproscan]. 0.03 OrthoFinder
OT_14G03080.1 No alias Ribosomal protein S13 [Interproscan]. 0.02 OrthoFinder
PTI_23G01020.1 No alias Ribosomal protein S13 [Interproscan]. 0.03 OrthoFinder
Sro2117_g315240.1 Contig3258.g25694 40S ribosomal protein S18 0.03 OrthoFinder
TP02G00280.1 No alias Ribosomal protein S13 [Interproscan]. 0.04 OrthoFinder
Vocar.0002s0337.1 32891179 Ribosomal protein S13 [Interproscan]. 0.02 OrthoFinder
XM_002505702.1 MICPUN_109369, 109369 Ribosomal protein S18 (RPS18) 0.03 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56629.1_9755 PRW56629 40S ribosomal S18 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001892 Ribosomal_S13 3 45
No external refs found!