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Aliases : HaLaN_06615, GFH11164
Description : Chloroplast carotene biosynthesis related protein
Gene families : OG_01_0000479 (OrthoFinder) Phylogenetic Tree(s): OG0000479_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01000380.1_cds_GFH11164.1_5641 | |
| Cluster | HCCA: Cluster_238 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre07.g320400 | 30774456 | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder | |
| Cre07.g320450 | 30775051 | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder | |
| Cre08.g384650 | 30773689 | Photosynthesis.photophosphorylation.photosystem... | 0.06 | OrthoFinder | |
| Cre09.g394325 | 30780217, ELI3 | Photosynthesis.photophosphorylation.photosystem... | 0.05 | OrthoFinder | |
| Cre14.g626750 | 30776408 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder | |
| Cre16.g679250 | 30778123, ELI1 | Photosynthesis.photophosphorylation.photosystem... | 0.05 | OrthoFinder | |
| Cz07g29280.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Cz07g30110.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.04 | OrthoFinder | |
| Cz08g00120.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.06 | OrthoFinder | |
| Cz14g24190.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.05 | OrthoFinder | |
| Cz17g16050.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.05 | OrthoFinder | |
| OT_04G01820.1 | No alias | FAS1 domain; Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| OT_13G02960.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Transcript_contig_55820 | 55820 | Hypothetical protein | 0.06 | OrthoFinder | |
| Transcript_contig_78826 | 78826 | Chlorophyll A-B binding protein [Interproscan]. | 0.06 | OrthoFinder | |
| Vocar.0001s0155.1 | 32884709 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Vocar.0006s0022.1 | 32894246 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| XM_002505734.1 | MICPUN_96716, 96716 | Early light induced protein-like 6, chloroplast... | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Enrichment |
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0000105 | histidine biosynthetic process | IEP | Enrichment |
| BP | GO:0003333 | amino acid transmembrane transport | IEP | Enrichment |
| MF | GO:0003684 | damaged DNA binding | IEP | Enrichment |
| MF | GO:0003906 | DNA-(apurinic or apyrimidinic site) endonuclease activity | IEP | Enrichment |
| MF | GO:0004399 | histidinol dehydrogenase activity | IEP | Enrichment |
| MF | GO:0004421 | hydroxymethylglutaryl-CoA synthase activity | IEP | Enrichment |
| MF | GO:0004601 | peroxidase activity | IEP | Enrichment |
| MF | GO:0004602 | glutathione peroxidase activity | IEP | Enrichment |
| CC | GO:0005737 | cytoplasm | IEP | Enrichment |
| BP | GO:0006082 | organic acid metabolic process | IEP | Enrichment |
| BP | GO:0006284 | base-excision repair | IEP | Enrichment |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Enrichment |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Enrichment |
| BP | GO:0006534 | cysteine metabolic process | IEP | Enrichment |
| BP | GO:0006535 | cysteine biosynthetic process from serine | IEP | Enrichment |
| BP | GO:0006547 | histidine metabolic process | IEP | Enrichment |
| BP | GO:0006563 | L-serine metabolic process | IEP | Enrichment |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | Enrichment |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Enrichment |
| BP | GO:0006865 | amino acid transport | IEP | Enrichment |
| BP | GO:0006950 | response to stress | IEP | Enrichment |
| BP | GO:0006979 | response to oxidative stress | IEP | Enrichment |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Enrichment |
| MF | GO:0008374 | O-acyltransferase activity | IEP | Enrichment |
| BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Enrichment |
| MF | GO:0009001 | serine O-acetyltransferase activity | IEP | Enrichment |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009070 | serine family amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0015849 | organic acid transport | IEP | Enrichment |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Enrichment |
| MF | GO:0016407 | acetyltransferase activity | IEP | Enrichment |
| MF | GO:0016412 | serine O-acyltransferase activity | IEP | Enrichment |
| MF | GO:0016413 | O-acetyltransferase activity | IEP | Enrichment |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Enrichment |
| MF | GO:0016746 | acyltransferase activity | IEP | Enrichment |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | Enrichment |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Enrichment |
| BP | GO:0019344 | cysteine biosynthetic process | IEP | Enrichment |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Enrichment |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Enrichment |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Enrichment |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Enrichment |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| MF | GO:0046912 | acyltransferase, acyl groups converted into alkyl on transfer | IEP | Enrichment |
| BP | GO:0050896 | response to stimulus | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Enrichment |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Enrichment |
| MF | GO:1901681 | sulfur compound binding | IEP | Enrichment |
| BP | GO:1903825 | organic acid transmembrane transport | IEP | Enrichment |
| BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |