1. Home
  2. Species
  3. Haematococcus lacustris
  4. Sequence
  5. lcl|BLLF01000376.1_cds_GFH11125.1_5602

lcl|BLLF01000376.1_cds_GFH11125.1_5602 (HaLaN_06568, GFH11125)


Aliases : HaLaN_06568, GFH11125

Description : WD_REPEATS_REGION domain-containing protein


Gene families : OG_01_0004829 (OrthoFinder) Phylogenetic Tree(s): OG0004829_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000376.1_cds_GFH11125.1_5602
Cluster HCCA: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020531.50 tig00020531_g10056.t1 Dynein assembly factor with WDR repeat domains 1... 0.02 OrthoFinder
Vocar.0013s0276.1 32896287 WD40 repeat [Interproscan]. 0.03 OrthoFinder
XM_003054923.1 MicpuC2_12446, 12446 WD40 repeat [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 248 285
IPR001680 WD40_repeat 122 160
IPR001680 WD40_repeat 206 244
IPR001680 WD40_repeat 83 118
IPR001680 WD40_repeat 8 34
IPR001680 WD40_repeat 164 201
IPR001680 WD40_repeat 39 76
No external refs found!