Cpa|evm.model.tig00021348.103 (tig00021348_g20609.t1)


Aliases : tig00021348_g20609.t1

Description : Probable histidine kinase 4 OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021348.103
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.236 tig00000042_g15634.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.03 OrthoFinder
Cpa|evm.model.tig00000190.40 tig00000190_g13861.t1 Ethylene receptor OS=Nicotiana tabacum 0.04 OrthoFinder
Cpa|evm.model.tig00000202.6 tig00000254_g22474.t1 Histidine kinase 3 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00001155.15 tig00001155_g7321.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020660.47 tig00020660_g12551.t1 UDP-xylose transporter 1 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre13.g571200 30784146 Probable histidine kinase 1 OS=Oryza sativa subsp. indica 0.02 OrthoFinder
Dusal.0675s00001.1 33202443 Histidine kinase/HSP90-like ATPase [Interproscan]. 0.01 OrthoFinder
Sro1939_g306550.1 Contig1997.g17090 Hybrid signal transduction histidine kinase J 0.01 OrthoFinder
Sro369_g128120.1 Contig1690.g15135 Hybrid signal transduction histidine kinase J 0.01 OrthoFinder
lcl|BLLF01001311.1_cds_GFH18511.1_12988 HaLaN_15330, GFH18511 Histidine kinase/HSP90-like ATPase [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01003144.1_cds_GFH26484.1_20961 HaLaN_24642, GFH26484 Signal transduction response regulator, receiver domain... 0.01 OrthoFinder
lcl|BLLF01008570.1_cds_GFH33431.1_27908 HaLaN_32803, GFH33431 Chlamyopsin-6 0.01 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57078.1_9242 PRW57078 Hybrid sensor histidine kinase response regulator 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006595 polyamine metabolic process IEP Enrichment
BP GO:0006596 polyamine biosynthetic process IEP Enrichment
BP GO:0006597 spermine biosynthetic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
BP GO:0008215 spermine metabolic process IEP Enrichment
BP GO:0008216 spermidine metabolic process IEP Enrichment
BP GO:0008295 spermidine biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0009309 amine biosynthetic process IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003594 HATPase_C 185 257
IPR003661 HisK_dim/P 78 143
No external refs found!