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  5. lcl|BLLF01000369.1_cds_GFH11052.1_5529

lcl|BLLF01000369.1_cds_GFH11052.1_5529 (HaLaN_06484, GFH11052)


Aliases : HaLaN_06484, GFH11052

Description : Phosphodiesterase


Gene families : OG_01_0000012 (OrthoFinder) Phylogenetic Tree(s): OG0000012_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000369.1_cds_GFH11052.1_5529
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021582.44 tig00021582_g22642.t1 Phytochrome 2 OS=Ceratodon purpureus 0.02 OrthoFinder
SymbC1.scaffold490.12 490.12 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.02 OrthoFinder
lcl|BLLF01001772.1_cds_GFH21166.1_15643 HaLaN_18411, GFH21166 3',5'-cyclic-nucleotide phosphodiesterase 0.02 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45060.1_2016 PRW45060 HD-domain PDEase isoform B 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
InterPro domains Description Start Stop
IPR002073 PDEase_catalytic_dom 100 399
No external refs found!