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  5. lcl|BLLF01000281.1_cds_GFH10023.1_4500

lcl|BLLF01000281.1_cds_GFH10023.1_4500 (HaLaN_05265, GFH10023)


Aliases : HaLaN_05265, GFH10023

Description : WD_REPEATS_REGION domain-containing protein


Gene families : OG_01_0001835 (OrthoFinder) Phylogenetic Tree(s): OG0001835_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000281.1_cds_GFH10023.1_4500
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020780.19 tig00020780_g13772.t1 No description available 0.04 OrthoFinder
Cre16.g652950 30777774 No description available 0.08 OrthoFinder
Cz16g01010.t1 No alias Minichromosome loss protein Mcl1, middle region; WD40... 0.09 OrthoFinder
EOD21019 No alias WD40 repeat; Minichromosome loss protein Mcl1, middle... 0.01 OrthoFinder
EOD24691 No alias WD40 repeat; Minichromosome loss protein Mcl1, middle... 0.05 OrthoFinder
OT_17G00940.1 No alias Minichromosome loss protein Mcl1, middle region; WD40... 0.03 OrthoFinder
PTI_22G02380.1 No alias Minichromosome loss protein Mcl1, middle region [Interproscan]. 0.03 OrthoFinder
PTI_22G02400.1 No alias Minichromosome loss protein Mcl1, middle region [Interproscan]. 0.03 OrthoFinder
Sro88_g046690.1 Contig265.g3327 WD repeat and HMG-box DNA binding protein 1 0.02 OrthoFinder
TP09G01570.1 No alias Minichromosome loss protein Mcl1, middle region [Interproscan]. 0.02 OrthoFinder
Transcript_contig_56687 56687 Minichromosome loss protein Mcl1, middle region; WD40... 0.05 OrthoFinder
XM_002508806.1 MICPUN_62102, 62102 Minichromosome loss protein Mcl1, middle region; WD40... 0.02 OrthoFinder
XM_003063935.1 MicpuC2_36835, 36835 Minichromosome loss protein Mcl1, middle region; WD40... 0.01 OrthoFinder
lcl|VRMN01000018.1_cds_KAA8490900.1_5672 KAA8490900 Minichromosome loss protein 1 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000444 MIS12/MIND type complex IEP Enrichment
BP GO:0000723 telomere maintenance IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
CC GO:0000818 nuclear MIS12/MIND complex IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!