Aliases : HaLaN_05249, GFH10007
Description : Prolycopene isomerase, chloroplastic
Gene families : OG_01_0000207 (OrthoFinder) Phylogenetic Tree(s): OG0000207_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|BLLF01000280.1_cds_GFH10007.1_4484 | |
Cluster | HCCA: Cluster_24 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00001095.9 | tig00001095_g7025.t1 | Prolycopene isomerase, chloroplastic OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
Cpa|evm.model.tig00001258.10 | tig00001258_g7832.t1 | No description available | 0.03 | OrthoFinder | |
Cpa|evm.model.tig00020723.8 | tig00020723_g13427.t1 | No description available | 0.01 | OrthoFinder | |
Cre09.g407200 | 30780595 | Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum | 0.05 | OrthoFinder | |
Cre16.g651923 | 30776797 | Secondary metabolism.terpenoids.terpenoid... | 0.02 | OrthoFinder | |
Cz14g22040.t1 | No alias | Amine oxidase [Interproscan]. | 0.06 | OrthoFinder | |
Dusal.0111s00019.1 | 33199801 | Amine oxidase [Interproscan]. | 0.02 | OrthoFinder | |
PTI_06G02910.1 | No alias | Amine oxidase [Interproscan]. | 0.01 | OrthoFinder | |
Sro1228_g254380.1 | Contig2695.g21739 | Prolycopene isomerase, chloroplastic | 0.01 | OrthoFinder | |
Sro1559_g282470.1 | Contig1268.g11842 | Prolycopene isomerase 2, chloroplastic | 0.02 | OrthoFinder | |
Sro1649_g288630.1 | Contig3529.g27273 | Prolycopene isomerase, chloroplastic | 0.02 | OrthoFinder | |
Sro570_g168610.1 | Contig131.g1484 | Prolycopene isomerase, chloroplastic | 0.02 | OrthoFinder | |
TP03G05800.1 | No alias | Amine oxidase [Interproscan]. | 0.02 | OrthoFinder | |
Transcript_contig_2488 | 2488 | NAD(P)-binding Rossmann-like domain [Interproscan]. | 0.01 | OrthoFinder | |
Transcript_contig_78738 | 78738 | Hypothetical protein | 0.02 | OrthoFinder | |
Vocar.0018s0001.1 | 32898723 | Amine oxidase [Interproscan]. | 0.01 | OrthoFinder | |
Vocar.0032s0058.1 | 32893700 | Amine oxidase [Interproscan]. | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0003333 | amino acid transmembrane transport | IEP | Enrichment |
MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Enrichment |
BP | GO:0006865 | amino acid transport | IEP | Enrichment |
MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | Enrichment |
BP | GO:0015849 | organic acid transport | IEP | Enrichment |
MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | Enrichment |
MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Enrichment |
MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Enrichment |
MF | GO:0016730 | oxidoreductase activity, acting on iron-sulfur proteins as donors | IEP | Enrichment |
MF | GO:0016832 | aldehyde-lyase activity | IEP | Enrichment |
MF | GO:0033743 | peptide-methionine (R)-S-oxide reductase activity | IEP | Enrichment |
MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | Enrichment |
BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
MF | GO:0098809 | nitrite reductase activity | IEP | Enrichment |
BP | GO:1903825 | organic acid transmembrane transport | IEP | Enrichment |
BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Enrichment |
No InterPro domains available for this sequence
No external refs found! |