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  5. lcl|BLLF01000279.1_cds_GFH09986.1_4463

lcl|BLLF01000279.1_cds_GFH09986.1_4463 (HaLaN_05222, GFH09986)


Aliases : HaLaN_05222, GFH09986

Description : Geranylgeranyl pyrophosphate synthase GGPPS1


Gene families : OG_01_0001967 (OrthoFinder) Phylogenetic Tree(s): OG0001967_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000279.1_cds_GFH09986.1_4463
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cre12.g484200 30791982, PPS2 Secondary metabolism.terpenoids.methylerythritol... 0.04 OrthoFinder
EOD26982 No alias Geranylgeranyl pyrophosphate synthase [Ensembl]. 0.03 OrthoFinder
OT_12G01210.1 No alias Polyprenyl synthetase [Interproscan]. 0.02 OrthoFinder
PTI_04G03070.1 No alias Polyprenyl synthetase [Interproscan]. 0.02 OrthoFinder
Sro379_g130420.1 Contig3398.g26559 Heterodimeric geranylgeranyl pyrophosphate synthase... 0.04 OrthoFinder
TP03G04110.1 No alias Polyprenyl synthetase [Interproscan]. 0.02 OrthoFinder
XM_002503601.1 MICPUN_104883, 104883 Geranyl pyrophosphate synthase (GGPS1) 0.02 OrthoFinder
XM_003054907.1 MicpuC2_50196, 50196 Geranyl pyrophosphate synthase (GGPS1) 0.02 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39174.1_2776 PRW39174 Geranylgeranyl diphosphate synthase 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 1 179
No external refs found!