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  5. lcl|BLLF01000253.1_cds_GFH09672.1_4149

lcl|BLLF01000253.1_cds_GFH09672.1_4149 (HaLaN_04857, GFH09672)


Aliases : HaLaN_04857, GFH09672

Description : RNase L inhibitor RLI, possible metal-binding domain; ABC transporter-like; 4Fe-4S ferredoxin-type, iron-sulphur binding domain [Interproscan].


Gene families : OG_01_0002778 (OrthoFinder) Phylogenetic Tree(s): OG0002778_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000253.1_cds_GFH09672.1_4149
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_54225 54225 4Fe-4S ferredoxin-type, iron-sulphur binding domain;... 0.01 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492669.1_9362 KAA8492669 ABC transporter E family member 2 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003724 RNA helicase activity IEP Enrichment
BP GO:0006188 IMP biosynthetic process IEP Enrichment
BP GO:0006189 'de novo' IMP biosynthetic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0046040 IMP metabolic process IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 117 148
IPR017896 4Fe4S_Fe-S-bd 60 81
IPR007209 RNaseL-inhib-like_metal-bd_dom 17 48
No external refs found!