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  5. lcl|BLLF01000249.1_cds_GFH09635.1_4112

lcl|BLLF01000249.1_cds_GFH09635.1_4112 (HaLaN_04814, GFH09635)


Aliases : HaLaN_04814, GFH09635

Description : RuvB-like helicase


Gene families : OG_01_0000819 (OrthoFinder) Phylogenetic Tree(s): OG0000819_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000249.1_cds_GFH09635.1_4112
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000350.28 tig00000350_g24328.t1 Chromatin organisation.chromatin remodeling... 0.04 OrthoFinder
Cpa|evm.model.tig00000836.8 tig00000836_g4692.t1 Chromatin organisation.chromatin remodeling... 0.06 OrthoFinder
Cre09.g414050 30781252 Chromatin organisation.chromatin remodeling... 0.04 OrthoFinder
Cre10.g442700 30789854 Chromatin organisation.chromatin remodeling... 0.04 OrthoFinder
Cz06g05110.t1 No alias TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.04 OrthoFinder
Dusal.0264s00015.1 33193104 TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.02 OrthoFinder
Dusal.0576s00001.1 33196155 TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.02 OrthoFinder
OT_14G00130.1 No alias TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.02 OrthoFinder
TP03G04100.1 No alias TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.02 OrthoFinder
TP12G02390.1 No alias TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.02 OrthoFinder
XM_002505536.1 MICPUN_98268, 98268 Rvb2-like protein 0.02 OrthoFinder
XM_003063649.1 MicpuC2_44976, 44976 TIP49, P-loop domain; RuvB-like, AAA-lid domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39102.1_2725 PRW39102 RuvB-like 2 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498499.1_7452 KAA8498499 RuvB-like 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR010339 TIP49_P-loop 24 291
IPR041048 RuvB-like_C 297 362
No external refs found!