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  5. lcl|BLLF01000249.1_cds_GFH09633.1_4110

lcl|BLLF01000249.1_cds_GFH09633.1_4110 (HaLaN_04811, GFH09633)


Aliases : HaLaN_04811, GFH09633

Description : 50S ribosomal protein L19, chloroplastic


Gene families : OG_01_0001014 (OrthoFinder) Phylogenetic Tree(s): OG0001014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000249.1_cds_GFH09633.1_4110
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Cre17.g734450 30782167, PRPL19 50S ribosomal protein L19, chloroplastic OS=Mesostigma viride 0.02 OrthoFinder
Cz11g03120.t1 No alias Ribosomal protein L19 [Interproscan]. 0.05 OrthoFinder
Dusal.0444s00003.1 33192973 Ribosomal protein L19 [Interproscan]. 0.02 OrthoFinder
OT_20G00580.1 No alias Ribosomal protein L19 [Interproscan]. 0.02 OrthoFinder
Sro79_g042660.1 Contig1826.g16073 Protein L19 0.01 OrthoFinder
SymbC1.scaffold4.334 4.334 PRC-barrel domain; Integrase, catalytic domain;... 0.01 OrthoFinder
XM_002504578.1 MICPUN_84692, 84692 Ribosomal protein L19 [Interproscan]. 0.03 OrthoFinder
XM_003063582.1 MicpuC2_11548, 11548 Ribosomal protein L19 [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56055.1_10000 PRW56055 50S ribosomal L19-chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001857 Ribosomal_L19 34 89
No external refs found!