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  5. lcl|BLLF01000246.1_cds_GFH09592.1_4069

lcl|BLLF01000246.1_cds_GFH09592.1_4069 (HaLaN_04768, GFH09592)


Aliases : HaLaN_04768, GFH09592

Description : WD_REPEATS_REGION domain-containing protein


Gene families : OG_01_0004194 (OrthoFinder) Phylogenetic Tree(s): OG0004194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000246.1_cds_GFH09592.1_4069
Cluster HCCA: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020556.10 tig00020556_g10981.t1 No description available 0.02 OrthoFinder
Cre13.g572700 30784662, IFT144 No description available 0.06 OrthoFinder
Dusal.0063s00016.1 33196771 WDR19, WD40 repeat [Interproscan]. 0.02 OrthoFinder
EOD17908 No alias WDR19, WD40 repeat [Interproscan]. 0.04 OrthoFinder
Vocar.0001s0188.1 32884575 WDR19, WD40 repeat [Interproscan]. 0.05 OrthoFinder
XM_003055138.1 MicpuC2_46374, 46374 WDR19, WD40 repeat; Coatomer, WD associated region;... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR039468 WDR19_WD40_rpt 449 506
No external refs found!