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  5. lcl|BLLF01000223.1_cds_GFH09298.1_3775

lcl|BLLF01000223.1_cds_GFH09298.1_3775 (HaLaN_04408, GFH09298)


Aliases : HaLaN_04408, GFH09298

Description : Hypothetical protein


Gene families : OG_01_0000004 (OrthoFinder) Phylogenetic Tree(s): OG0000004_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000223.1_cds_GFH09298.1_3775
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01000003.1_cds_GFH05613.1_90 HaLaN_00106, GFH05613 Hypothetical protein 0.06 OrthoFinder
lcl|BLLF01000132.1_cds_GFH08036.1_2513 HaLaN_02932, GFH08036 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01000139.1_cds_GFH08123.1_2600 HaLaN_03038, GFH08123 Hypothetical protein 0.06 OrthoFinder
lcl|BLLF01000282.1_cds_GFH10037.1_4514 HaLaN_05280, GFH10037 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01000309.1_cds_GFH10355.1_4832 HaLaN_05654, GFH10355 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01000312.1_cds_GFH10403.1_4880 HaLaN_05710, GFH10403 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01000420.1_cds_GFH11639.1_6116 HaLaN_07171, GFH11639 Hypothetical protein 0.06 OrthoFinder
lcl|BLLF01000794.1_cds_GFH15008.1_9485 HaLaN_11157, GFH15008 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01001291.1_cds_GFH18367.1_12844 HaLaN_15161, GFH18367 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01001298.1_cds_GFH18415.1_12892 HaLaN_15217, GFH18415 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01001388.1_cds_GFH18984.1_13461 HaLaN_15868, GFH18984 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01001470.1_cds_GFH19480.1_13957 HaLaN_16433, GFH19480 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01002209.1_cds_GFH23180.1_17657 HaLaN_20755, GFH23180 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01002384.1_cds_GFH23874.1_18351 HaLaN_21565, GFH23874 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01003210.1_cds_GFH26697.1_21174 HaLaN_24887, GFH26697 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01003232.1_cds_GFH26762.1_21239 HaLaN_24965, GFH26762 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01003294.1_cds_GFH26937.1_21414 HaLaN_25171, GFH26937 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01003524.1_cds_GFH27558.1_22035 HaLaN_25900, GFH27558 Hypothetical protein 0.12 OrthoFinder
lcl|BLLF01003772.1_cds_GFH28174.1_22651 HaLaN_26618, GFH28174 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01004179.1_cds_GFH29091.1_23568 HaLaN_27694, GFH29091 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01004743.1_cds_GFH30169.1_24646 HaLaN_28967, GFH30169 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01008205.1_cds_GFH33286.1_27763 HaLaN_32634, GFH33286 Hypothetical protein 0.05 OrthoFinder
lcl|BLLF01008205.1_cds_GFH33287.1_27764 HaLaN_32635, GFH33287 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0030686 90S preribosome IEP Enrichment
CC GO:0030688 preribosome, small subunit precursor IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!