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  5. Cpa|evm.model.tig00021319.55

Cpa|evm.model.tig00021319.55 (tig00021319_g20248.t1)


Aliases : tig00021319_g20248.t1

Description : Flagellar WD repeat-containing protein Pf20 OS=Chlamydomonas reinhardtii


Gene families : OG_01_0005751 (OrthoFinder) Phylogenetic Tree(s): OG0005751_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021319.55
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Cre04.g227900 30791439, PF20 Flagellar WD repeat-containing protein Pf20... 0.11 OrthoFinder
Cz10g10170.t1 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
Dusal.0838s00003.1 33185230 Hypothetical protein 0.04 OrthoFinder
EOD09634 No alias WD40 repeat [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold519.6 519.6 WD40 repeat [Interproscan]. 0.03 OrthoFinder
Vocar.0001s1782.1 32885460 WD40 repeat [Interproscan]. 0.11 OrthoFinder
XM_002499995.1 MICPUN_96259, 96259 Flagellar WD repeat protein PF20 (PF20) 0.08 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005929 cilium IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
CC GO:0031514 motile cilium IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0120025 plasma membrane bounded cell projection IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 453 489
IPR001680 WD40_repeat 284 320
IPR001680 WD40_repeat 327 363
IPR001680 WD40_repeat 369 405
IPR001680 WD40_repeat 537 573
IPR001680 WD40_repeat 410 447
No external refs found!