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  5. lcl|BLLF01000177.1_cds_GFH08685.1_3162

lcl|BLLF01000177.1_cds_GFH08685.1_3162 (HaLaN_03686, GFH08685)


Aliases : HaLaN_03686, GFH08685

Description : Glutamate-rich WD repeat domain-containing protein


Gene families : OG_01_0002321 (OrthoFinder) Phylogenetic Tree(s): OG0002321_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: lcl|BLLF01000177.1_cds_GFH08685.1_3162
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Cre17.g724850 30782603 WD-40 repeat-containing protein MSI2 OS=Arabidopsis thaliana 0.01 OrthoFinder
Dusal.1675s00001.1 33198115 Histone-binding protein RBBP4, N-terminal [Interproscan]. 0.02 OrthoFinder
EOD10636 No alias Histone-binding protein RBBP4, N-terminal; WD40 repeat... 0.02 OrthoFinder
OT_06G00690.1 No alias Histone-binding protein RBBP4, N-terminal; WD40 repeat... 0.01 OrthoFinder
TP01G02670.1 No alias WD40 repeat; Histone-binding protein RBBP4, N-terminal... 0.01 OrthoFinder
Vocar.0001s1447.1 32885852 WD40 repeat; Histone-binding protein RBBP4, N-terminal... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0005047 signal recognition particle binding IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
MF GO:0033897 ribonuclease T2 activity IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
InterPro domains Description Start Stop
IPR022052 Histone-bd_RBBP4_N 54 77
No external refs found!