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  5. Cpa|evm.model.tig00021319.17

Cpa|evm.model.tig00021319.17 (tig00021319_g20212.t1)


Aliases : tig00021319_g20212.t1

Description : Solute transport.carrier-mediated transport.MC-type solute transporter


Gene families : OG_01_0000324 (OrthoFinder) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021319.17
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Cz11g10160.t1 No alias Mitochondrial substrate/solute carrier [Interproscan]. 0.02 OrthoFinder
PTI_01G05640.1 No alias Mitochondrial substrate/solute carrier [Interproscan]. 0.02 OrthoFinder
Sro644_g180500.1 Contig3672.g28380 Adenosylmethionine carrier 1, chloroplastic/mitochondrial 0.02 OrthoFinder
XM_003061482.1 MicpuC2_51314, 51314 Mitochondrial substrate/solute carrier; EF-hand domain... 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499634.1_8587 KAA8499634 Putative S-adenosylmethionine carrier 2, chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 66 143
IPR018108 Mitochondrial_sb/sol_carrier 148 228
IPR018108 Mitochondrial_sb/sol_carrier 245 279
No external refs found!