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  5. lcl|BLLF01000163.1_cds_GFH08468.1_2945

lcl|BLLF01000163.1_cds_GFH08468.1_2945 (HaLaN_03438, GFH08468)


Aliases : HaLaN_03438, GFH08468

Description : Ribosomal protein L1/ribosomal biogenesis protein [Interproscan].


Gene families : OG_01_0002737 (OrthoFinder) Phylogenetic Tree(s): OG0002737_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000163.1_cds_GFH08468.1_2945
Cluster HCCA: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
Cre07.g314100 30774816 No description available 0.03 OrthoFinder
Dusal.0023s00040.1 33198038 Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. 0.02 OrthoFinder
OT_05G05050.1 No alias Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. 0.01 OrthoFinder
PTI_04G01660.1 No alias Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. 0.02 OrthoFinder
TP14G02420.1 No alias Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. 0.02 OrthoFinder
Transcript_contig_78583 78583 Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. 0.02 OrthoFinder
XM_002508792.1 MICPUN_69792, 69792 Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000844.1_cds_GFH15391.1_9868 HaLaN_11613, GFH15391 Ribosomal protein L1/ribosomal biogenesis protein [Interproscan]. 0.05 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493741.1_4503 KAA8493741 Ribosomal L1 domain-containing protein 1 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0071569 protein ufmylation IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR028364 Ribosomal_L1/biogenesis 41 232
No external refs found!