Aliases : HaLaN_03167, GFH08236
Description : Rubisco activase
Gene families : OG_01_0000770 (OrthoFinder) Phylogenetic Tree(s): OG0000770_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|BLLF01000147.1_cds_GFH08236.1_2713 | |
Cluster | HCCA: Cluster_99 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00020848.90 | tig00020848_g14621.t1 | Ribulose bisphosphate carboxylase/oxygenase activase,... | 0.04 | OrthoFinder | |
Cpa|evm.model.tig00020848.91 | tig00020848_g14621.t1 | Ribulose bisphosphate carboxylase/oxygenase activase,... | 0.04 | OrthoFinder | |
Cre04.g229300 | 30791545, RCA1 | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.11 | OrthoFinder | |
Cz13g02230.t1 | No alias | ATPase, AAA-type, core [Interproscan]. | 0.04 | OrthoFinder | |
OT_04G02530.1 | No alias | ATPase, AAA-type, core [Interproscan]. | 0.03 | OrthoFinder | |
Transcript_contig_58545 | 58545 | ATPase, AAA-type, core [Interproscan]. | 0.01 | OrthoFinder | |
Transcript_contig_89419 | 89419 | Hypothetical protein | 0.03 | OrthoFinder | |
Vocar.0001s1749.1 | 32884852 | ATPase, AAA-type, core [Interproscan]. | 0.1 | OrthoFinder | |
Vocar.0004s0119.1 | 32889477 | ATPase, AAA-type, core [Interproscan]. | 0.02 | OrthoFinder | |
XM_002501464.1 | MICPUN_58139, 58139 | Ribulose bisphosphate carboxylase/oxygenase... | 0.05 | OrthoFinder | |
XM_002506056.1 | MICPUN_88065, 88065 | Ribulose bisphosphate carboxylase/oxygenase activase (RCA) | 0.02 | OrthoFinder | |
XM_003057947.1 | MicpuC2_32785, 32785 | Ribulose bisphosphate carboxylase/oxygenase activase,... | 0.02 | OrthoFinder | |
lcl|LHPG02000002.1_cds_PRW60797.1_4613 | PRW60797 | Rubisco activase | 0.05 | OrthoFinder | |
lcl|LHPG02000004.1_cds_PRW59108.1_7247 | PRW59108 | Rubisco activase | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000295 | adenine nucleotide transmembrane transporter activity | IEP | Enrichment |
MF | GO:0003824 | catalytic activity | IEP | Enrichment |
MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | Enrichment |
MF | GO:0005346 | purine ribonucleotide transmembrane transporter activity | IEP | Enrichment |
MF | GO:0005347 | ATP transmembrane transporter activity | IEP | Enrichment |
MF | GO:0005471 | ATP:ADP antiporter activity | IEP | Enrichment |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Enrichment |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0006862 | nucleotide transport | IEP | Enrichment |
MF | GO:0008509 | anion transmembrane transporter activity | IEP | Enrichment |
MF | GO:0008514 | organic anion transmembrane transporter activity | IEP | Enrichment |
MF | GO:0015215 | nucleotide transmembrane transporter activity | IEP | Enrichment |
MF | GO:0015216 | purine nucleotide transmembrane transporter activity | IEP | Enrichment |
MF | GO:0015217 | ADP transmembrane transporter activity | IEP | Enrichment |
MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Enrichment |
MF | GO:0015297 | antiporter activity | IEP | Enrichment |
MF | GO:0015301 | anion:anion antiporter activity | IEP | Enrichment |
MF | GO:0015605 | organophosphate ester transmembrane transporter activity | IEP | Enrichment |
BP | GO:0015748 | organophosphate ester transport | IEP | Enrichment |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | Enrichment |
MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Enrichment |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | Enrichment |
MF | GO:0016831 | carboxy-lyase activity | IEP | Enrichment |
MF | GO:0016854 | racemase and epimerase activity | IEP | Enrichment |
MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | Enrichment |
MF | GO:0022853 | active ion transmembrane transporter activity | IEP | Enrichment |
MF | GO:0030246 | carbohydrate binding | IEP | Enrichment |
MF | GO:0030247 | polysaccharide binding | IEP | Enrichment |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Enrichment |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Enrichment |
MF | GO:0140323 | solute:anion antiporter activity | IEP | Enrichment |
MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Enrichment |
MF | GO:2001070 | starch binding | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003959 | ATPase_AAA_core | 145 | 286 |
No external refs found! |