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Aliases : HaLaN_03092, GFH08171
Description : Putative chloroplast carotenoid isomerase
Gene families : OG_01_0000207 (OrthoFinder) Phylogenetic Tree(s): OG0000207_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|BLLF01000143.1_cds_GFH08171.1_2648 | |
| Cluster | HCCA: Cluster_7 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00001095.9 | tig00001095_g7025.t1 | Prolycopene isomerase, chloroplastic OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
| Cpa|evm.model.tig00001258.10 | tig00001258_g7832.t1 | No description available | 0.03 | OrthoFinder | |
| Cpa|evm.model.tig00020723.8 | tig00020723_g13427.t1 | No description available | 0.02 | OrthoFinder | |
| Cre16.g651923 | 30776797 | Secondary metabolism.terpenoids.terpenoid... | 0.05 | OrthoFinder | |
| Cz14g22040.t1 | No alias | Amine oxidase [Interproscan]. | 0.02 | OrthoFinder | |
| EOD14379 | No alias | NAD(P)-binding Rossmann-like domain [Interproscan]. | 0.04 | OrthoFinder | |
| EOD16224 | No alias | Amine oxidase [Interproscan]. | 0.02 | OrthoFinder | |
| Sro1228_g254380.1 | Contig2695.g21739 | Prolycopene isomerase, chloroplastic | 0.02 | OrthoFinder | |
| Sro570_g168610.1 | Contig131.g1484 | Prolycopene isomerase, chloroplastic | 0.02 | OrthoFinder | |
| TP15G02230.1 | No alias | NAD(P)-binding Rossmann-like domain; Amine oxidase... | 0.03 | OrthoFinder | |
| Transcript_contig_2488 | 2488 | NAD(P)-binding Rossmann-like domain [Interproscan]. | 0.01 | OrthoFinder | |
| Vocar.0032s0058.1 | 32893700 | Amine oxidase [Interproscan]. | 0.03 | OrthoFinder | |
| XM_002503327.1 | MICPUN_113305, 113305 | FAD dependent oxidoreductase | 0.03 | OrthoFinder | |
| XM_002505732.1 | MICPUN_96715, 96715 | Amine oxidase | 0.03 | OrthoFinder | |
| XM_003063775.1 | MicpuC2_42987, 42987 | Amine oxidase [Interproscan]. | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | Enrichment |
| MF | GO:0003712 | transcription coregulator activity | IEP | Enrichment |
| MF | GO:0003713 | transcription coactivator activity | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004743 | pyruvate kinase activity | IEP | Enrichment |
| BP | GO:0006096 | glycolytic process | IEP | Enrichment |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | Enrichment |
| BP | GO:0006536 | glutamate metabolic process | IEP | Enrichment |
| BP | GO:0006537 | glutamate biosynthetic process | IEP | Enrichment |
| BP | GO:0006629 | lipid metabolic process | IEP | Enrichment |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | Enrichment |
| BP | GO:0006721 | terpenoid metabolic process | IEP | Enrichment |
| BP | GO:0006757 | ATP generation from ADP | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Enrichment |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | Enrichment |
| MF | GO:0015930 | glutamate synthase activity | IEP | Enrichment |
| BP | GO:0016114 | terpenoid biosynthetic process | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | Enrichment |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Enrichment |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Enrichment |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Enrichment |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Enrichment |
| MF | GO:0030955 | potassium ion binding | IEP | Enrichment |
| MF | GO:0031420 | alkali metal ion binding | IEP | Enrichment |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Enrichment |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Enrichment |
| BP | GO:0043650 | dicarboxylic acid biosynthetic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | Enrichment |
| BP | GO:0046031 | ADP metabolic process | IEP | Enrichment |
| MF | GO:0046429 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | IEP | Enrichment |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | Enrichment |
| MF | GO:0051213 | dioxygenase activity | IEP | Enrichment |
| MF | GO:0052592 | oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |