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  5. lcl|BLLF01000117.1_cds_GFH07803.1_2280

lcl|BLLF01000117.1_cds_GFH07803.1_2280 (HaLaN_02662, GFH07803)


Aliases : HaLaN_02662, GFH07803

Description : 40S ribosomal protein SA


Gene families : OG_01_0002089 (OrthoFinder) Phylogenetic Tree(s): OG0002089_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000117.1_cds_GFH07803.1_2280
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01000494.1_cds_GFH12355.1_6832 HaLaN_08023, GFH12355 40S ribosomal protein SA 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001865 Ribosomal_S2 134 204
No external refs found!