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  5. lcl|BLLF01000108.1_cds_GFH07667.1_2144

lcl|BLLF01000108.1_cds_GFH07667.1_2144 (HaLaN_02499, GFH07667)


Aliases : HaLaN_02499, GFH07667

Description : U6 snRNA-associated Sm LSm2


Gene families : OG_01_0004507 (OrthoFinder) Phylogenetic Tree(s): OG0004507_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000108.1_cds_GFH07667.1_2144
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
Sro559_g166540.1 Contig536.g6970 Sm-like protein LSM2 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 95 133
No external refs found!