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  5. lcl|BLLF01000108.1_cds_GFH07656.1_2133

lcl|BLLF01000108.1_cds_GFH07656.1_2133 (HaLaN_02487, GFH07656)


Aliases : HaLaN_02487, GFH07656

Description : Centrin


Gene families : OG_01_0000037 (OrthoFinder) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000108.1_cds_GFH07656.1_2133
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
EOD14806 No alias EF-hand domain [Interproscan]. 0.01 OrthoFinder
EOD27565 No alias EF-hand domain [Interproscan]. 0.01 OrthoFinder
Sro1012_g231150.1 Contig304.g3985 Calmodulin-5/6/7/8 0.01 OrthoFinder
Sro2763_g336500.1 Contig1113.g10703 Myosin light chain 1/3, skeletal muscle isoform 0.01 OrthoFinder
SymbC1.scaffold2372.3 2372.3 EF-hand domain [Interproscan]. 0.01 OrthoFinder
XM_002505526.1 MICPUN_77142, 77142 EF-hand domain [Interproscan]. 0.01 OrthoFinder
XM_003055480.1 MicpuC2_11510, 11510 EF-hand domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 32 93
No external refs found!