lcl|BLLF01000102.1_cds_GFH07545.1_2022 (HaLaN_02363, GFH07545)


Aliases : HaLaN_02363, GFH07545

Description : MPN domain-containing protein


Gene families : OG_01_0001747 (OrthoFinder) Phylogenetic Tree(s): OG0001747_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000102.1_cds_GFH07545.1_2022
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000093.137 tig00000093_g3562.t1 RNA processing.RNA splicing.U2-type-intron-specific... 0.03 OrthoFinder
Cre01.g016050 30789071, PRP8 RNA processing.RNA splicing.U2-type-intron-specific... 0.04 OrthoFinder
Dusal.0327s00002.1 33200457 Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding;... 0.02 OrthoFinder
EOD10350 No alias PRO8NT domain [Interproscan]. 0.02 OrthoFinder
EOD24715 No alias PROCT domain; RNA recognition motif, spliceosomal PrP8;... 0.03 OrthoFinder
OT_11G00220.1 No alias Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding;... 0.02 OrthoFinder
Vocar.0007s0419.1 32887966 RNA recognition motif, spliceosomal PrP8;... 0.01 OrthoFinder
XM_003061325.1 MicpuC2_48200, 48200 PROCN domain; PROCT domain; Pre-mRNA-processing-splicing... 0.03 OrthoFinder
lcl|BLLF01000717.1_cds_GFH14365.1_8842 HaLaN_10406, GFH14365 MPN domain-containing protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0017070 U6 snRNA binding IEA Interproscan
MF GO:0030623 U5 snRNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Enrichment
MF GO:0004834 tryptophan synthase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006568 tryptophan metabolic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006586 indolalkylamine metabolic process IEP Enrichment
MF GO:0008184 glycogen phosphorylase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0042430 indole-containing compound metabolic process IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR019581 Prp8_U5-snRNA-bd 521 654
IPR019580 Prp8_U6-snRNA-bd 753 911
IPR012984 PROCT 1526 1642
IPR019582 RRM_spliceosomal_PrP8 297 387
IPR012592 PROCN 1 112
IPR000555 JAMM/MPN+_dom 1413 1512
IPR021983 PRP8_domainIV 1071 1300
No external refs found!