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  5. lcl|BLLF01000099.1_cds_GFH07495.1_1972

lcl|BLLF01000099.1_cds_GFH07495.1_1972 (HaLaN_02305, GFH07495)


Aliases : HaLaN_02305, GFH07495

Description : Snf7 family [Interproscan].


Gene families : OG_01_0000736 (OrthoFinder) Phylogenetic Tree(s): OG0000736_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000099.1_cds_GFH07495.1_1972
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
EOD07074 No alias Vacuolar protein sorting protein 24 [Ensembl]. 0.01 OrthoFinder
OT_12G01970.1 No alias Snf7 family [Interproscan]. 0.02 OrthoFinder
TP01G08520.1 No alias Snf7 family [Interproscan]. 0.03 OrthoFinder
Transcript_contig_67861 67861 Snf7 family [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58749.1_7288 PRW58749 Vacuolar sorting-associated 2-like protein 1-like 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498509.1_7462 KAA8498509 Charged multivesicular body protein 2b 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0030688 preribosome, small subunit precursor IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR005024 Snf7_fam 24 168
No external refs found!