Aliases : HaLaN_01811, GFH07062
Description : COP-II coat subunit
Gene families : OG_01_0000893 (OrthoFinder) Phylogenetic Tree(s): OG0000893_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|BLLF01000072.1_cds_GFH07062.1_1539 | |
Cluster | HCCA: Cluster_105 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000829.3 | tig00000829_g4645.t1 | Vesicle trafficking.Coat protein II (COPII) coatomer... | 0.02 | OrthoFinder | |
Sro1952_g307420.1 | Contig4337.g32706 | Transport protein SEC24 | 0.02 | OrthoFinder | |
Sro196_g083380.1 | Contig3206.g25334 | Transport protein SEC24 | 0.02 | OrthoFinder | |
Transcript_contig_54514 | 54514 | Sec23/Sec24 beta-sandwich; Zinc finger,... | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006886 | intracellular protein transport | IEA | Interproscan |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEA | Interproscan |
CC | GO:0030127 | COPII vesicle coat | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Enrichment |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Enrichment |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Enrichment |
MF | GO:0005515 | protein binding | IEP | Enrichment |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Enrichment |
BP | GO:0006397 | mRNA processing | IEP | Enrichment |
BP | GO:0006486 | protein glycosylation | IEP | Enrichment |
BP | GO:0006487 | protein N-linked glycosylation | IEP | Enrichment |
BP | GO:0008380 | RNA splicing | IEP | Enrichment |
BP | GO:0016071 | mRNA metabolic process | IEP | Enrichment |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | Enrichment |
BP | GO:0018196 | peptidyl-asparagine modification | IEP | Enrichment |
BP | GO:0018279 | protein N-linked glycosylation via asparagine | IEP | Enrichment |
CC | GO:0031090 | organelle membrane | IEP | Enrichment |
BP | GO:0043413 | macromolecule glycosylation | IEP | Enrichment |
BP | GO:0070085 | glycosylation | IEP | Enrichment |
No external refs found! |