lcl|BLLF01000068.1_cds_GFH06999.1_1476 (HaLaN_01732, GFH06999)

Aliases : HaLaN_01732, GFH06999

Description : rRNA biogenesis protein RRP36 [Interproscan].

Gene families : OG_01_0003424 (OrthoFinder) Phylogenetic Tree(s): OG0003424_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|BLLF01000068.1_cds_GFH06999.1_1476
Cluster	HCCA: Cluster_291

Target	Alias	Description	ECC score	Gene Family Method
Transcript_contig_56670	56670	rRNA biogenesis protein RRP36 [Interproscan].	0.03	OrthoFinder
XM_002508572.1	MICPUN_62192, 62192	rRNA biogenesis protein RRP36 [Interproscan].	0.03	OrthoFinder
lcl\|LHPG02000026.1_cds_PRW18411.1_5822	PRW18411	Ribosomal RNA processing 36-like protein	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000469	cleavage involved in rRNA processing	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	None	Extended
BP	GO:0090501	RNA phosphodiester bond hydrolysis	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Enrichment
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Enrichment
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Enrichment
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Enrichment
MF	GO:0016859	cis-trans isomerase activity	IEP	Enrichment
BP	GO:0018208	peptidyl-proline modification	IEP	Enrichment
BP	GO:0030001	metal ion transport	IEP	Enrichment
MF	GO:0043565	sequence-specific DNA binding	IEP	Enrichment
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR009292	RRP36	1	156

External Links

No external refs found!