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  5. lcl|BLLF01000055.1_cds_GFH06772.1_1249

lcl|BLLF01000055.1_cds_GFH06772.1_1249 (HaLaN_01462, GFH06772)


Aliases : HaLaN_01462, GFH06772

Description : Hypothetical protein


Gene families : OG_01_0000016 (OrthoFinder) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000055.1_cds_GFH06772.1_1249
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01000038.1_cds_GFH06417.1_894 HaLaN_01044, GFH06417 Hypothetical protein 0.06 OrthoFinder
lcl|BLLF01001050.1_cds_GFH16780.1_11257 HaLaN_13271, GFH16780 Hypothetical protein 0.04 OrthoFinder
lcl|BLLF01003023.1_cds_GFH26107.1_20584 HaLaN_24198, GFH26107 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Enrichment
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment

No InterPro domains available for this sequence

No external refs found!